Biologia plantarum 44:203-206, 2001 | DOI: 10.1023/A:1010287006431
Cytosine Methylation Changes in Rice Centromeric and Telomeric Sequences Induced by Foreign DNA Introgression
- 1 Institute of Genetics and Cytology, Northeast Normal University, Changchun, People's Republic of China
- 2 Tonghua Academy of Agriculture, Hailong, People's Republic of China
Cytosine methylation changes (hyper- or hypomethylation) in centromeric and telomeric sequences were observed in all three studied rice introgression lines containing DNA from wild rice, Zizania latifolia Griseb. The changed genomic Southern hybridization patterns were complex and non-concordant between a pair of isoschizomers (HpaII/MspI) digests, indicating methylation modifications at both the inner and outer cytosines of the CCGG sites. The changed patterns were inherited through generations. Possible mechanism for the methylation changes and their potential implications for the phenotypic variation and genome organization are discussed.
Keywords: chromosome structure; epigenetic changes; introgression lines; Oryza sativa L.
Subjects: chromosomal morphology, structure; introgression lines, rice; Oryza sativa; rice; Zizania latifolia
Published: June 1, 2001 Show citation
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References
- Allshire, R.C., Gosden, J.R., Cross, S.H., Cranston, G., Rout, D., Suguwara, N., Szostak, J.W., Fantes, P.A., Hastie, N.D.: Telomeric repeat from T. thermophila cross hybridizes to human telomeres.-Nature 332: 656-659, 1988.
Go to original source... - Aragon-Alcaide, L., Miller, T., Schwarzacher, T., Reader, S., Moore, G.: A cereal centromeric sequence.-Chromosoma 105: 261-268, 1996.
Go to original source... - Cox, A.V., Bennett, S.T., Parokonny, A.S., Kenton, A., Callimassia, M.A., Bennett, M.D.: Comparison of plant telomeres using PCR-generated synthetic probes.-Ann. Bot. 72: 239-247, 1993.
Go to original source... - Feinberg, A.P., Vogelstein, B.A.: A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.-Anal. Biochem. 132: 6-13, 1983.
Go to original source... - Jiang, J.M., Nasuda, S., Dong, F.G., Scherrer, C.W., Woo, S.S., Wing, R.A., Gill, B.S., Ward, D.C.: A conserved repetitive DNA element located in the centromeres of cereal chromosomes.-Proc. nat. Acad. Sci. USA 93: 14210-14213, 1996.
Go to original source... - Liu, B., Piao, H.M., Zhao, F.S., Zhao, J.H., Zhao, R.: Production and molecular characterization of rice lines derived from a distant cross between rice and Zizania latifolia Griseb.-J. Genet. Breed. 53: 279-284, 1999a.
Go to original source... - Liu, B., Piao, H.M., Zhao, F.S., Zhao, J.H., Liu, Z.L., Huang, B.Q.: DNA methylation changes in rice induced by Zizania latifolia (Griseb.) DNA introgression.-Hereditas 131: 75-78, 1999b.
Go to original source... - Liu, B., Segal, G., Vega, J. M., Feldman, M., Abbo, S.: Isolation and characterization of chromosome-specific DNA sequences from a chromosome arm genomic library of common wheat.-Plant J. 11: 959-965, 1997.
Go to original source... - Matzke, M.A., Sheid, O.M., Matzke, A.J.M.: Rapid structural and epigenetic changes in polyploid and aneuploid genomes.-BioEssays 21: 761-767, 1999.
Go to original source... - McClelland, M., Nelson, M., Raschke, E.: Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases.-Nucleic Acids Res. 22: 3640-3659, 1994.
Go to original source... - O'Neill, R.J.W., O'Neill, M.J.O., Granes, J.A.M.: Under-methylation associated with retroelement activation and chromosome remodeling in an interspecies mammalian hybrid.-Nature 393: 68-72, 1998.
Go to original source... - Phillips, R. L., Kaeppler, S. M., Olhoft, P.: Genetic instability of plant tissue culture: breakdown of normal controls.-Proc. nat. Acad. Sci. USA 91: 5222-5226, 1994.
Go to original source... - Richards, E.J.: DNA methylation and plant development.-Trends Genet. 13: 319-323, 1997.
Go to original source... - Scheid, O.M., Jakovleva, L., Afsar, K., Maluszynska, J., Paszkowski, J.: A change of ploidy can modify epigenetic silencing.-Proc. nat. Acad. Sci. USA. 93: 7114-7119, 1996.
Go to original source... - Selker, E.U.: Epigenetic phenomena in filamentous fungi: useful paradigms or repeat-induced confusion?-Trends Genet. 13: 296-301, 1997.
Go to original source... - Vongs, A., Kakutani, T., Martienssen, R.A., Richards, E.J.: Arabidopsis thaliana DNA methylation mutants.-Science 260: 1926-1298, 1993.
Go to original source... - Xiong, L.Z., Xu, C.G., Saghai Maroof, M.A., Zhang, Q.F.: Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation sensitive amplification technique.-Mol. gen. Genet. 261: 439-446, 1999.
Go to original source... - Yoder, J.A., Walsh, C.P., Bestor, T.H.: Cytosine methylation and ecology of intragenomic parasites.-Trends Genet. 13: 335-340, 1997.
Go to original source...



