biologia plantarum

International journal on Plant Life established by Bohumil Němec in 1959

Biologia plantarum 49:371-380, 2005 | DOI: 10.1007/s10535-005-0010-0

Expression of modified 7SL RNA gene in transgenic Solanum tuberosum plants

L. Vrba1,*, J. Matousek1
1 Department of Molecular Genetics, Institute of Plant Molecular Biology, Academy of Sciences of the Czech Republic, Ceske Budejovice, Czech Republic

A modified plant 7SL RNA gene from Arabidopsis thaliana designated AHIIA63M was introduced into potato plants via Agrobacterium-mediated transformation. No transgenic plants could be obtained using pGPTV-based binary vectors where AHIIA63M gene driven by polIII promoter was located close to the polII promoter of the selection gene. Special binary vectors with matrix attachment region (MAR) elements had to be used for transformation to insulate polII and polIII promoters within T-DNA. The level of AHIIA63M RNA in transgenic plants was lower than the levels of transcripts of transgenes driven by RNA polymerase II. The level of AHIIA63M transcript in transgenic potato plants was tissue specific. The highest expression was detected in roots and gynoecium and the lowest in tubers. Moreover, non-specific promoter activity within the MAR element was revealed. This activity contributed to AHIIA63M transcription. This is the first report of expression of a modified 7SL RNA gene in transgenic plants and promoter activity within the MAR element.

Keywords: RNA polymerase III; polIII expression cassette; MAR element
Subjects: Agrobacterium tumefaciens; Arabidopsis thaliana; beta-glucuronidase; matrix attachement region, MAR element; nuclear DNA content; potato, transgenic plants; reverse transcriptase polymerase chain reaction; RNA polymerase III; Solanum tuberosum; transgenic plants; viroids

Received: June 14, 2004; Accepted: January 4, 2005; Published: September 1, 2005  Show citation

ACS AIP APA ASA Harvard Chicago Chicago Notes IEEE ISO690 MLA NLM Turabian Vancouver
Vrba, L., & Matousek, J. (2005). Expression of modified 7SL RNA gene in transgenic Solanum tuberosum plants. Biologia plantarum49(3), 371-380. doi: 10.1007/s10535-005-0010-0
Download citation

References

  1. Ahlquist, P.: NA-dependent RNA polymerases, viruses, and RNA silencing.-Science 296: 1270-1273, 2002. Go to original source...
  2. Allen, G.C., Hall, G., Jr., Michalowski, S., Newman, W., Spiker, S., Weissinger, A.K., Thompson, W.F.: High-level transgene expression in plant cells: Effect of a strong scaffold attachment region from tobacco.-Plant Cell 8: 899-913, 1996. Go to original source...
  3. Ame, J.C., Schreiber, V., Fraulob, V., Dolle, P., De Murcia, G., Niedergang, C.P.: Bidirectional promoter connects the poly(ADP-ribose) polymerase 2 (PARP-2) gene to the gene for RNase P RNA-structure and expression of the mouse PARP-2 gene.-J. biol. Chem. 276: 11092-11099, 2001. Go to original source...
  4. Arnold, J.G., Schmutzler, C., Thomann, U., Van Tol, H., Gross, H.J.: The human tRNAVal gene family: organization, nucleotide sequences and homologous transcription of three single-copy genes.-Gene 44: 287-297, 1986. Go to original source...
  5. Becker, D., Kemper, E., Schell, J., Masterson, R.: New plant binary vectors with selectable markers located proximal to the left T-DNA border.-Plant mol. Biol. 20: 1195-1197, 1992. Go to original source...
  6. Bode, J., Stengeert-Iber, M., Kay, V., Schlake, T., Dietz-Pfeilstetter, A.: Scaffold/matrix-attached regions: topological switches with multiple regulatory functions.-Crit. Rev. Eukar. Gene Expression 6: 115-138, 1996. Go to original source...
  7. Bolton, E.C., Boeke, J.D.: Transcriptional interactions between yeast tRNA genes, flanking genes and Ty elements: A genomic point of view.-Genome Res. 13: 254-263, 2003. Go to original source...
  8. Bonifer, C., Vidal, M., Grosveld, F., Sippel A.E.: Tissue specific and position independent expression of the complete gene domain for chicken lysozyme in transgenic mice.-EMBO J. 9: 2843-2848, 1990. Go to original source...
  9. Bourque, J.E., Folk, W.R.: Suppression of gene-expression in plant cells utilizing antisense sequences transcribed by RNA polymerase-III.-Plant mol. Biol. 19: 641-647, 1992. Go to original source...
  10. Brouwer, C., Bruce, W., Maddock, S., Avramova, Z., Bowen, B.: Suppression of transgene silencing by matrix attachment regions in maize: A dual role for the maize 5 ' ADH1 matrix attachment region.-Plant Cell 14: 2251-2264, 2002. Go to original source...
  11. Campos, N., Palau, J., Zwich, C.: Diversity of 7 SL RNA from the signal recognition particle of maize endosperm.-Nucl. Acids Res. 17: 1573-1588, 1989. Go to original source...
  12. Flores, R., Delgado, S., Gas, M.E., Carbonell, A., Molina, D., Gago, S., De la Pena, M.: Viroids: the minimal non-coding RNAs with autonomous replication.-FEBS Lett. 567: 42-48, 2004. Go to original source...
  13. Fukuda, Y., Nishikawa, S.: Matrix attachment regions enhance transcription of a downstream transgene and the accessibility of its promoter region to micrococcal nuclease.-Plant mol. Biol. 51: 665-675, 2003. Go to original source...
  14. Gross, H.J., Domdey, H., Lossow, C., Jank, P., Raba, M., Alberty, H., Sanger, H.L.: Nucleotide sequence and secondary structure of potato spindle tuber viroid.-Nature 273: 203-208, 1978. Go to original source...
  15. Hall, G., Allen, G.C., Loer, D.S., Thompson, W.F., Spiker, S.: Nuclear scaffolds and scaffold-attachment regions in higher-plants.-Proc. nat. Acad. Sci. USA 88: 9320-9324, 1991. Go to original source...
  16. Heard, D.J., Filipowicz, W., Marques, J.P., Palme, K., Gualberto, J.M.: An upstream U-snRNA gene-like promoter is required for transcription of the Arabidopsis thaliana 7SL RNA gene.-Nucl. Acids Res. 23: 1970-1976, 1995. Go to original source...
  17. Hull, M.W., Erickson, J., Johnston, M., Engelke, D.R.: tRNA genes as transcriptional repressor elements.-Mol. cell. Biol. 14: 1266-1277, 1994. Go to original source...
  18. Kendall, A., Hull, M.W., Bertrand, E., Good, P.D., Singer, R.H., Engelke, D.R.: A CBF5 mutation that disrupts nucleolar localization of early tRNA biosynthesis in yeast also suppresses tRNA gene-mediated transcriptional silencing.-Proc. nat. Acad. Sci. USA 97: 13108-13113, 2000. Go to original source...
  19. Laemmli, U.K., Kas, E., Poljak, L., Adachi, Y.: Scaffold-associated regions: cis-acting determinants of chromatin structural loops and functional domains.-Curr. Opinion Genet. Dev. 2: 275-285, 1992. Go to original source...
  20. Liu, J.W., Tabe, L.M.: The influences of two plant nuclear matrix attachment regions (MARs) on gene expression in transgenic plants.-Plant Cell Physiol. 39: 115-123, 1998. Go to original source...
  21. Loss, P., Schmitz, M., Steger, G., Riesner, D.: Formation of a thermodynamically metastable structure containing hairpin-II is critical for infectivity of potato spindle tuber viroid RNA.-EMBO J. 10: 719-727, 1991. Go to original source...
  22. Lutcke, H.: Signal recognition particle (SRP), a ubiquitous initiator of protein translocation.-Eur. J. Biochem. 228: 531-550, 1995. Go to original source...
  23. Matousek, J., Junker, V., Vrba, L., Schubert, J., Patzak, J., Steger, G.: Molecular characterization and genome organization of 7SL RNA genes from hop (Humulus lupulus L.).-Gene 239: 173-183, 1999. Go to original source...
  24. Matousek, J., Schroder, A.R.W., Trnena, L., Reimers, M., Baumstark, T., Dedie, P., Vlasak, J., Becker, I., Kreuzaler, F., Fladung, M., Riesner, D.: Inhibition of viroid infection by antisense RNA expression in transgenic plants.-Biol. Chem. Hoppe-Seyler 375: 765-777, 1994. Go to original source...
  25. Matousek, J., Vrba, L., Kuchar, M., Pavingerova, D., Orctova, L., Ptacek, J., Schubert, J., Steger, G., Beier, H., Riesner, D.: New antisense RNA systems targeted against plant pathogens.-Korean J. Plant Tissue Cult. 27: 379-385, 2000.
  26. Meyer, P.: Variation of transgene expression in plants.-Euphytica 85: 359-366, 1995. Go to original source...
  27. Mlynarova, L., Hricova, A., Loonen, A., Nap, J.-P.: The presence of a chromatin boundary appears to shield a transgene in tobacco from RNA silencing.-Plant Cell 15: 2203-2217, 2003. Go to original source...
  28. Mlynarova, L., Jansen, R.C., Conner, A.J., Stiekema, W.J., Nap, J.-P.: The MAR-mediated reduction in position effect can be uncoupled from copy number-dependent expression in transgenic plants.-Plant Cell 7: 599-609, 1995. Go to original source...
  29. Mlynarova, L., Keizer, L.C.P., Stiekema, W.J., Nap, J.-P.: Approaching the lower limits of transgene variability.-Plant Cell 8: 1589-1599, 1996. Go to original source...
  30. Mlynarova, L., Libantova, J., Vrba, L., Nap, J.-P.: The promiscuity of heterospecific lox sites increases dramatically in the presence of palindromic DNA.-Gene 296: 129-137, 2002. Go to original source...
  31. Mlynarova, L., Loonen, A., Heldens, J., Jansen, R.C., Keizer, P., Stiekema, W.J., Nap, J-P.: Reduced position effect in mature transgenic plants conferred by the chicken lysozyme matrix-associated region.-Plant Cell 6: 417-426, 1994. Go to original source...
  32. Murashige, T., Skoog, F.: A revised medium for rapid growth and bio assays with tobacco tissue cultures.-Physiol. Plant. 15: 473-497, 1962. Go to original source...
  33. Murfett, J., Bourque, J.E., McClure, B.A.: Antisense suppression of S-RNase expression in Nicotiana using RNA-polymerase-II-transcribed and RNA-polymerase-III-transcribed gene constructs.-Plant mol. Biol. 29: 201-212, 1995. Go to original source...
  34. Namciu, S.J., Blochlinger, K.B., Fournier, R.E.K.: Human matrix attachment regions insulate transgene expression from chromosomal position effects in Drosophila melanogaster.-Mol. cell. Biol. 18: 2382-2391, 1998. Go to original source...
  35. Novak, P., Matousek, J., Briza, J.: Valerophenone synthase-like chalcone synthase homologues in Humulus lupulus.-Biol. Plant. 46: 375-381, 2003. Go to original source...
  36. Paul, A.-L., Ferl, R.J.: Higher order chromatin structure in maize and arabidopsis.-Plant Cell 10: 1349-1359, 1998. Go to original source...
  37. Perriman, R., Bruening, G., Dennis, E.S., Peacock, W.J.: Effective ribozyme delivery in plant cells.-Proc. nat. Acad. Sci. USA 92: 6175-6179, 1995. Go to original source...
  38. Petersen, K., Leah, R., Knudsen, S., Cameron-Mills, V.: Matrix attachment regions (MARs) enhance transformation frequencies and reduce variance of transgene expression in barley.-Plant mol. Biol. 49: 45-58, 2002. Go to original source...
  39. Phi-Van, L., Straling, W.H.: The matrix attachment regions of the chicken lysozyme gene co-map with the boundaries of the chromatin domain.-EMBO J. 7: 655-664, 1988. Go to original source...
  40. Phi-Van, L., Stratling, W.H.: Dissection of the ability of the chicken lysozyme gene 5' matrix attachment region to stimulate transgene expression and to dampen position effects.-Biochemistry 35: 10735-10742, 1996. Go to original source...
  41. Poljak, L., Seum, C., Mattioni, T., Laemmli, U.K.: SARs stimulate but do not confer position independent gene expression.-Nucl. Acids Res. 22: 4386-4394, 1994. Go to original source...
  42. Poritz, M.A., Siegel, V., Hansen, W., Walter, P.: Small ribonucleoproteins in Schizosaccharomyces pombe and Yarrowia lipolytica homologous to signal recognition particle.-Proc. nat. Acad. Sci. USA 85: 4315-4319, 1988. Go to original source...
  43. Riedel, L., Putz, A., Hauser, M-T., Luckinger, R., Wassenegger, M., Sanger, H.L.: Characterization of the signal recognition particle (SRP) RNA population of tomato (Lycopersicon esculentum).-Plant mol. Biol. 27: 669-680, 1995. Go to original source...
  44. Riedel, L., Volger, U., Luckinger, R., Putz, A., Sanger, H. L., Wassenegger, M.: Molecular analysis of the gene family of the signal recognition particle (SRP) RNA of tomato.-Plant mol. Biol. 31: 113-125, 1996. Go to original source...
  45. Schindler, I.M., Muhlbach, H.P.: Involvement of nuclear DNA-dependent RNA-polymerases in potato spindle tuber viroid replication-A reevaluation.-Plant Sci. 84: 221-229, 1992. Go to original source...
  46. Stief, A., Winter, D.M., Stratling, W.H., Sippel, A.E.: A nuclear DNA attachment element mediates elevated and position-independent gene activity.-Nature 341: 343-345, 1989. Go to original source...
  47. Tomilin, N.V., Iguchi-Ariga, S.M.M., Ariga, H.: Transcription and replication silencer element is present within conserved region of human Alu repeats interacting with nuclear protein.-FEBS Lett. 263: 69-72, 1990. Go to original source...
  48. Ulker, B., Allen, G.C., Thompson, W.F., Spiker, S., Weissinger, A.K.: A tobacco matrix attachment region reduces the loss of transgene expression in the progeny of transgenic tobacco plants.-Plant J. 18: 253-263, 1999. Go to original source...
  49. Ullu, E., Weiner, A.M.: Human genes and pseudogenes for the 7SL RNA component of signal recognition particle.-EMBO J. 3: 3303-3310, 1984. Go to original source...
  50. Van Engelen, F.A., Molthoff, J.W., Conner, A.J., Nap, J-P., Pereira, A., Stiekema, W.J.: pBinPLUS: An improved plant transformation vector based on pBin19.-Transgenic Res. 4: 288-290, 1995. Go to original source...
  51. Walter, P., Blobel, G.: Signal recognition particle contains a 7S RNA essential for protein translocation across the endoplasmic-reticulum.-Nature 299: 691-698, 1982. Go to original source...
  52. Wassenegger, M., Heimes, S., Riedel, L., Sanger, H.L.: RNA-directed de novo methylation of genomic sequences in plants.-Cell 76: 567-576, 1994. Go to original source...
  53. Yukawa, Y., Matousek, J., Grimm, M., Vrba, L., Steger, G., Sugiura, M., Beier, H.: Plant 7SL RNA and tRNATyr genes with inserted antisense sequences are efficiently expressed in an in vitro transcription system from Nicotiana tabacum cells.-Plant mol. Biol. 50: 713-723, 2002. Go to original source...