Biologia plantarum 50:551-558, 2006 | DOI: 10.1007/s10535-006-0087-0
Differential distribution of transcripts from genes involved in polyamine biosynthesis in bean plants
- 1 Instituto Potosino de Investigación Científica y Tecnológica, División de Biología Molecular, Tangamanga, San Luis Potosí, SLP, México
Partial cDNAs sequences for arginine decarboxylase (Pvadc), S-adenosylmethionine decarboxylase (Pvsamdc) and spermidine synthase (Pvspds) were isolated from the bean Phaseolus vulgaris using primers designed from conserved regions of enzymes belonging to plant species. Sequence analysis showed that the Pvadc, Pvsamdc and Pvspds genes were most closely related to the orthologous genes from Glycine max, Phaseolus lunatus and Pisum sativum, respectively. The expression patterns of the genes, together with that of ornithine decarboxylase (Pvodc), were analysed in young and mature leaves, stems, roots, root tips, petals, stigma, ovaries, filaments and anthers of bean plants. Pvsamdc was found to be expressed at similar levels in all tissues. The other transcripts showed tissue specific expression. Pvadc was barely expressed in petals and not at all in roots tips, Pvspds was mainly expressed in roots, stigma and filaments, and Pvodc was detected only in roots.
Keywords: arginine decarboxylase; ornithine decarboxylase; Phaseolus vulgaris; S-adenosylmethionine decarboxylase; spermidine synthase
Subjects: adenosylmethionine decarboxylase; Arabidopsis thaliana; arginine decarboxylase; bean; Capsicum annuum; Carica papaya; Datura stramonium; Daucus carota; dendrogram, phylogenetic tree, phenogram; 3,6-dichloro-o-anisic acid; Hyoscyamus niger; Ipomoea nil; Lycopersicon esculentum; Malus domestica; Mangifera indica; Nicotiana sylvestris; Nicotiana tabacum; ornithine decarboxylase; Oryza sativa; pea; Phaseolus lunatus; Phaseolus vulgaris; Pisum sativum; polyamines; polymerase chain reaction (PCR); putrescine; reverse transcriptase polymerase chain reaction (RT-PCR); Solanum tuberosum; spermidine; spermidine synthase; spermine; spermine synthase; Vitis vinifera; Zea mays
Received: September 23, 2004; Accepted: September 1, 2005; Published: December 1, 2006 Show citation
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References
- Alabadi, D., Carbonell, J.: Expression of ornithine decarboxylase is transiently increased by pollination, 2,4-dichlorophenoxyacetic acid, and gibberellic acid in tomato ovaries.-Plant Physiol. 118: 323-328, 1998.
Go to original source... - Ekstrom, J.L., Mathews, I.I., Stanley, B.A., Pegg, A.E., Ealick, S.E.: The crystal structure of human S-adenosylmethionine decarboxylase at 2.25 Å resolution reveals a novel fold.-Structure Folding Design 7: 583-595, 1999.
Go to original source... - El Ghachtouli, N., Martin-Tanguy, J., Paynot M., Gianinazzi, S.: First report of the inhibition of arbuscular mycorrhizal infection of Pisum sativum by specific and irreversible inhibition of polyamine biosynthesis or by gibberellict reatment.-FEBS Lett. 385: 189-192, 1996.
Go to original source... - Feirer, R.P., Mignon, G., Litvay, J.D.: Arginine decarboxylase and polyamines required for embryogenesis in the wild carrot.-Science 223: 1433-1435, 1984.
Go to original source... - Franceschetti, M., Hanfrey, C., Scaramagli, S., Torrigiani, P., Bagni, N., Burtin, D., Michael, A.J.: Characterization of monocot and dicot plant S-adenosyl-L-methionine decarboxylase gene families including identification in the mRNA of a highly conserved pair of upstream overlapping open reading frames.-Biochem. J. 353: 403-409, 2001.
Go to original source... - Galston, A.W., Kaur-Sawhney, R.: Polyamines.-Plant Physiol. 94: 406-410, 1990.
Go to original source... - Hanfrey, C., Franceschetti, M., Mayer, M., Illingworth, C., Michael, A.J.: Abrogation of upstream open reading frame-mediated translational control of a plant S-adenosylmethionine decarboxylase results in polyamine disruption and growth perturbations.-J. biol. Chem. 277: 44131-44139, 2002.
Go to original source... - Hanzawa, Y., Imai, A., Michael, J.A., Komeda, Y., Takahashi, T.: Characterization of the spermidine synthase-related gene family in Arabidopsis thaliana.-FEBS Lett. 527: 176-180, 2002.
Go to original source... - Higgins, D.G., Sharp, P.M.: Clustal: a package for performing multiple sequence alignments on a microcomputer.-Gene 73: 237-244, 1988.
Go to original source... - Jarvis, B.C., Yasmin, S., Coleman, M.T.: RNA and protein metabolism during adventitious root formation in stem cuttings of Phaseolus aureus cv. Berkin.-Physiol. Plant. 64: 53-59, 1985.
Go to original source... - Jiménez-Bremont, J.F., Camacho-Villasana, Y.M., Cabrera-Ponce, J.L., Barba de la Rosa, A.P., Ochoa-Alejo, N.: Sequence comparison of plant ornithine decarboxylases reveals high homology and lack of introns.-Biol. Plant. 48: 193-198, 2004.
Go to original source... - Kakkar, R.K., Nagar, P.K.: Polyamine and senescence of maintenance foliage of tea [Camellia sinensis L.(O) Kuntze].-Biol. Plant. 38: 153-157, 1996.
Go to original source... - Kakkar, R.K., Nagar, P.K.: Distribution and changes in endogenous polyamines during winter dormancy in tea (Camellia sinensis L. (O) Kuntze).-J. Plant Physiol. 151: 63-67, 1997.
Go to original source... - Kakkar, R.K., Rai, V.K.: Plant polyamines in flowering and fruit rippening.-Phytochemistry 33: 1281-1288, 1993.
Go to original source... - Kakkar, R.K., Nagar, P.K., Ahuja, P.S., Rai, V.K.: Polyamines and plant morphogenesis.-Biol. Plant. 43: 1-11, 2000.
Go to original source... - Kumar, A., Altabella, T., Taylor, M.A., Tiburcio, A.F.: Recent advances in polyamine research.-Trends Plant Sci. 2: 124-130, 1997.
Go to original source... - Kwak, S., Lee, S.H.: The regulation of ornithine decarboxylase gene expression by sucrose and small upstream open reading frame in tomato (Lycopersicon esculentum Mill).-Plant Cell Physiol. 42: 314-323, 2001.
Go to original source... - Lee, Y.S., Cho, Y.D.: Identification of essential active-site residues in ornithine decarboxylase of Nicotiana glutinosa decarboxylating both L-ornithine and L-lysine.-Biochem. J. 360: 657-665, 2001.
Go to original source... - Mad Arif, S.A., Taylor, M.A., George, L.A., Butler, A.R., Burch, L.R., Davies, H.V., Stark, M.J.R., Kumar, A.: Characterization of the S-adenosylmethionine decarboxylase (SAMDC) gene of potato.-Plant mol. Biol. 26: 327-338, 1994.
Go to original source... - Malmberg, R.L., Watson, M.B, Galloway, G.L., Yu, W.: Molecular genetic analysis of plant polyamines.-Crit. Rev. Plant Sci. 17: 199-224, 1998.
Go to original source... - Marco, F., Carrasco, P.: Expression of the pea S-adenosylmethionine decarboxylase gene is involved in developmental and environmental responses.-Planta 214: 641-647, 2002.
Go to original source... - Martin-Tanguy, J.: Conjugated polyamines and reproductive development: biochemical, molecular and physiological approaches.-Physiol. Plant. 100: 675-688, 1997.
Go to original source... - Michael, A.J., Furze, J.M., Rhodes, M.J.C., Burtin, D.: Molecular cloning and functional identification of a plant ornithine decarboxylase cDNA.-Biochem. J. 314: 241-248, 1996.
Go to original source... - Moore, R.C., Boyle, S.M.: Nucleotide sequence and analysis of the speA gene encoding biosynthetic arginine decarboxylase in Escherichia coli.-J. Bacteriol. 172: 4631-40, 1990.
Go to original source... - Muchitch, M.J., Edwards, L.A., Fletcher, J.S.: Influence of diamines and polyamines on the senescence of plant suspension cultures.-Plant Cell Rep. 2: 82-84, 1983.
Go to original source... - Nam, K.H, Lee, S.H., Lee, J.H.: Differential expression of ADC mRNA during development and upon acid stress in soybean (Glycine max) hypocotyls.-Plant Cell Physiol. 38: 1156-1166, 1997.
Go to original source... - O'Gara, M., McCloy, K., Malone, T., Cheng, X.: Structure-based sequence alignment of three AdoMet-dependent DNA methyltransferases.-Gene 157: 135-138, 1995.
Go to original source... - Perez-Amador, M.A., Carbonell, J., Granell, A.: Expression of arginine decarboxylase is induced during early fruti-development and in young tissues of Pisum sativum (L).-Plant mol. Biol. 28: 997-1009, 1995.
Go to original source... - Rastogi, R., Dulson, J., Rothstein, S.J.: Cloning of tomato (Lycopersicon esculentum Mill.) arginine decarboxylase gene and its expression during fruit ripening.-Plant Physiol. 103: 829-834, 1993.
Go to original source... - Rechsteiner, M., Rogers, S.W.: PEST sequences and regulation by proteolysis.-Trends Biochem. Sci. 21: 267-271, 1996.
Go to original source... - Sandmeier, E., Hale, T.I., Christen, P.: Multiple evolutionary origin of pyridoxal-5'-phosphate-dependent amino acid decarboxylases.-Eur. J. Biochem. 221: 997-1002, 1994.
Go to original source... - Sekowska, A., Bertin, P., Danchin, A.: Characterization of polyamine synthesis pathway in Bacillus subtilis 168.-Mol. Microbiol. 29: 851-858, 1998.
Go to original source... - Tabor, C.W., Tabor, H.: Polyamines.-Annu. Rev. Biochem. 53: 749-790, 1984.
Go to original source... - Tiburcio, A.F., Kaur-Sawhney, R., Galston, A.W.: Polyamine metabolism.-In: Miflin, B.J., Lea, P.J., (ed.): The Biochemistry of Plants, Intermediary Nitrogen Fixation. Pp. 283-325. Academic Press, New York 1990.
Go to original source... - Watson, M.B., Emory, K.K., Piatak, R.M., Malmberg, R.L.: Arginine decarboxylase (polyamine synthesis) mutants of Arabidopsis thaliana exhibit altered root growth.-Plant J. 13: 231-239, 1998.
Go to original source... - Yoshida, I., Yamagata, H., Hirasawa, E.: Blue-and red-light regulation and circadian control of gene expression of S-adenosylmethionine decarboxylase in Pharbitis nil.-J. exp. Bot. 50: 319-326, 1999.
Go to original source...



