Due to possible climate changes, heat stress has obtained a serious concern all over the world. Tolerance to this stress via knowledge of metabolic pathways will help us in engineering heat tolerant plants. A group of proteins called heat shock proteins are synthesized following stress and their synthesis is regulated by transcription factors. Under high temperature (HT), reactive oxygen species (ROS) are often induced and can cause damage to lipids, proteins, and nucleic acids. To scavenge the ROS and maintain cell membrane stability, synthesis of antioxidants, osmolytes, and heat shock proteins is of a vital importance. In view of above mentioned, this review highlights the detailed mechanism of pathways involving crucial steps that change during HT stress.

The effect of benzothiadiazole (BTH) and arbutin (ARB) on sugar metabolism and plant fitness in cucumber growing hydroponically in media with different doses of NO₃ ^- and urea as nitrogen sources (100 % NO₃ ^-, 75 % NO₃ ^- + 25 % urea, and 50 % NO₃ ^- + 50 % urea) was studied on the 7^th and 14^th day after the treatment. The glucose, sucrose, and chlorophyll (Chl) content, acid and alkaline invertases and lactate dehydrogenase activities, as well as leaf area of the 3^rd and 5^th leaves were determined. Urea changed the plant sugar metabolism in a dose-, time- and leaf-age-dependent manners and influenced a cucumber response to the BTH and ARB treatments. The BTH caused a significant cessation of growth, a decrease in Chl content, a reduction of leaf area, and an enhancement of lactate dehydrogenase and alkaline invertase activities. In the older leaves of the BTH-treated plants, a high accumulation of glucose and sucrose was found. At the lower dose of urea, the metabolic changes were limited. In the ARB-treated plants, the Chl content remained unchanged in all the nitrogen variants. In these plants, decrease in glucose and sucrose content and in both invertase activities was observed mainly in younger leaves of the plants grown on the high dose of urea. The ARB improved the fitness of the cucumber plants grown in the presence of urea.

Plant microRNAs (miRNAs) play important roles in regulating plant growth, development, and responses to abiotic stresses. In this study, 38 miRNAs (TaMIRs) from wheat (Triticum aestivum L.), 36 from the miRBase database, and two from our previous work were characterized and subjected to an expression pattern analysis under normal conditions and a drought stress. A semiquantitative reverse transcriptase polymerase chain reaction (RT-PCR), real-time quantitative PCR (qPCR), and small RNA blot analyses revealed that two TaMIRs (TaMIR1120 and TaMIR1123) were root-predominant and two TaMIRs (TaMIR1121 and TaMIR1134) were leaf-predominant. Seven TaMIR precursors showed altered expressions after the drought; of these, TaMIR1136 was upregulated, whereas TaMIR156, TaMIR408, TaMIR1119, TaMIR1129, TaMIR1133, and TaMIR1139 were downregulated. These seven drought-responsive TaMIRs showed dose-dependent and typical temporal expression patterns during drought induction, and they gradually returned back under the normal growth conditions. The drought-responsive and the tissue-predominant TaMIRs had varying numbers of target genes. Randomly selected target genes exhibited opposite expression patterns to their corresponding TaMIRs suggesting that they were regulated by distinct TaMIRs through a post-transcriptional cleavage. The target genes regulated by drought-responsive and tissue-predominant TaMIRs are involved in various cellular processes, such as signal transduction, transcriptional regulation, primary and secondary metabolisms, development, and defense responses. These results provide a novel insight into the miRNA-mediated responses of wheat to drought stress.

The effects of short-term osmotic stress [a polyethylene glycol (PEG) treatment] on photosystem II (PS II) of upland and lowland rice seedlings were investigated using chlorophyll (Chl) fluorescence imaging. Spatial heterogeneity in the top fully expanded leaf for all Chl fluorescence parameters was found under stress conditions. After exposure to PEG, a decrease in the effective quantum yield of PS II photochemistry (φPS II) and photochemical quenching (qP), and an increase in non-photochemical quenching (NPQ) proceeded from the upper section to the base of the leaf. The most sensitive position in the leaf was different between the two ecotypes. Chl fluorescence parameters, net photosynthetic rates (P_N), and stomatal conductance (g_s) were more sensitive to the PEG stress in upland rice than in lowland rice. These results also indicate different leaf anatomy and development in the two rice ecotypes. Additionally, the findings suggest a more rapid stress response in upland rice.

In this study, the anthocyanin content and real-time quantitative expression of the anthocyanin biosynthesis-related genes were investigated in leaves, stems, and tubers of purple yam (Dioscorea alata L.). The anthocyanin content, its accumulation, and the expression of genes encoding phenylalanine ammonia lyase (PAL), flavanone-3-hydroxylase (F3H), anthocyanidin synthase (ANS), and UDP-glycose flavonoid glycosyl transferase (UFGT) were studied. The anthocyanin content in the leaves and stems was high at early stages of growth, but it decreased and remained at a similar level from the 35^th day onward. The anthocyanin content in the tubers firstly increased, reached a high peak at the 110^th day of growth, after which decreased. Anthocyanin accumulation rates and the expressions of the anthocyanin biosynthesis genes were high at the early stages of growth in the leaves and stems, but in tubers, two peaks were observed: at days 80 and 140 for the gene expression and at days 125 and 170 for the anthocyanin accumulation rate. Thus, there was coordination between the gene expressions and the anthocyanin accumulation rates in the various organs as well as in the entire plants.

Germin and germin-like proteins (GLPs) are a broad and diverse family of developmentally regulated proteins widely distributed in plants. Oryza sativa L. harbours a large family of GLPs and serves as a good model for their study. In the present study, a germin-like protein gene (OsRGLP1) of rice origin was characterized by its heterologous expression in tobacco. The real-time PCR established almost a uniform expression of OsRGLP1 in leaves, stem, and roots of T₁ Nicotiana tabacum cv. Samsun. Although no morphological difference was apparent between T₀ transgenic and wild-type plants, leaves of mature transgenic plants showed necrotic lesions associated with an elevated content of H₂O₂, which was evidenced by in situ 3,3'-diaminobenzidine staining. A significantly higher activity of heat resistant superoxide dismutase (SOD) was observed in the transgenic plants as compared to the wild-type. The SOD activity in the transgenic plants was insensitive to potassium cyanide and sensitive to H₂O₂.

Phospholipase D (PLD) and its product phosphatidic acid are now considered to be one of the key elements of numerous physiological processes in plants including the salicylic acid signalling pathway. The presented study investigates the transcriptional regulation of Brassica napus PLDs following treatments with defense-related stimuli. We cloned eight B. napus genes encoding members of PLDβ, γ, and δ isoforms and performed phylogenetic analysis with its ancestor species Brassica rapa and Brassica oleracea, and with the model plant Arabidopsis thaliana. Transcription of the identified genes was monitored after treatment with benzothiadiazole (BTH), methyl jasmonate (MeJA), bacterial elicitor flg22, wounding, and after infection with fungal pathogens Sclerotinia sclerotiorum and Leptosphaeria maculans. Most of the genes responded specifically to a particular treatment. Remarkably the genes encoding the PLDγ and PLDβ isoforms were up-regulated by stimuli associated with the salicylic acid signalling pathway. The generality of this finding was confirmed by the analysis of public transcriptional data from Arabidopsis thaliana.

Analysis of structural changes of octoploid triticale genomes was conducted in F₂ and F₃ generations. The plants were derived from crosses of five cultivars and breeding lines of hexaploid wheat (Triticum aestivum L.) with one cultivar of rye (Secale cereale L). The study used four marker systems: inter-simple sequence repeat (ISSR), inter-retrotransposon amplified polymorphism (IRAP), retrotransposon-microsatellite amplified polymorphism (REMAP), and a technique named inter-transposon amplified polymorphism (ITAP) developed by the authors. Most frequently, elimination of specific bands was observed, especially of rye bands. Depending on the cross combination, the percentage of eliminated rye bands ranged from 73.6 to 80.6 %. A lower percentage of wheat bands was eliminated, i.e., from 57.6 to 76.48 %, depending on the combination of crosses. The emergence of new types of bands in hybrids absent in the parental forms was the rarest phenomenon (14.5-17.9 %). The results indicate the ongoing process of genome rearrangements at the molecular level in the early generations of plant crosses that also involve repeated nucleotide sequences of DNA.

To investigate whether exogenous sucrose can protect cucumber from water stress, cucumber (Cucumis sativus L.) seedlings were pretreated with 90 mM sucrose or 90 mM mannitol for 1 d and then were dehydrated with 10 % (m/v) polyethylene glycol (PEG) 6000 for further 1 d. Dehydration inhibited plant growth and decreased osmotic potential and relative water content (RWC) in leaves. The pretreatment with 90 mM sucrose further reduced the osmotic potential but increased the RWC and alleviated the growth inhibition. Compared with the PEG treatment alone, the combination of sucrose + PEG increased the activities of superoxide dismutase, guaiacol peroxidase, glutathione reductase, dehydroascorbate reductase, monodehydroascorbate reductase, ascorbate peroxidase, and glutathione peroxidase, and elevated the content of endogenous sucrose, glucose, and fructose together with the activities of soluble acid invertase and neutral invertase. This was in accordance with the enhanced transcription of genes encoding copper/zinc superoxide dismutase, guaiacol peroxidase, and glutathione reductase. Furthermore, the sucrose pretreatment decreased the content of malondialdehyde and hydrogen peroxide and increased the content of ascorbate, reduced glutathione, and proline under the dehydration. Taken together, the pretreatment with 90 mM sucrose, but much less with mannitol, induced antioxidants, proline, and soluble sugars and thus reduced dehydration-caused damage to the cucumber seedlings.

Barley (Hordeum vulgare L.), an important food and fodder crop, is potentially tolerant to salinity. To identify quantitative trait loci (QTLs) controlling salt tolerance, the population of 162 recombinant inbred lines (RILs) derived from F8 generation of Arigashar (an extremely salt tolerant Iranian six-rowed barley landrace) crossed with Igri (a salt semi-sensitive two-rowed cultivar) were evaluated. The growth of shoots, roots, and coleoptiles, and root numbers are four important growth characteristics severely affected by salt stress at seedling growth stages. A linkage map was constructed using 106 AFLP and SSR markers spanning six barley chromosomes including 2(2H), 3(3H), 4(4H), 7(5H), 6(6H), and 1(7H). Out of totally 26 detected QTLs, 17 QTLs were found effective for salt tolerance at 250 and 350 mM NaCl which localized on chromosomes 2H, 3H, 4H, 6H, 7H, and linkage group L1, whereas considering equivalent overlapped QTLs with a pleiotropic effect led to detection of totally 9 distinctive QTLs (QClgH2.1b, QSdgH2.1b, QSlgH2.1c, QNrgH2.1b, QTwgH2.2c, QSdg3Hb, QSlg4Hb1, QClg4Hb, and QSlg6Hc2) effective for salinity tolerance. 2(2H), 4(4H), and 6(6H) were major chromosomes harboring QTLs which effectively controlled salt tolerance in the Igri×Arigashar population. An interesting QTL, QTwg4Hc, was localized on chromosome 4H in the XE41-M61 marker distance that controls several traits including shoot and coleoptile lengths and shoot fresh mass under salt stress. A dense marker cluster around a resistance gene could offer a starting point for positional cloning.

Protein synthesis is a ubiquitous and essential process in all organisms, including plants. It is primarily regulated at translation initiation stage which is mediated through a number of translation initiation factors (eIFs). It is now becoming more apparent that in addition to synthesis of proteins, eIFs also regulate various aspects of plant development and their interaction with environment. Translation initiation factors, such as eIF3, eIF4A, eIF4E, eIF4G, and eIF5A affect different processes during vegetative and reproductive growth like embryogenesis, xylogenesis, flowering, sporogenesis, pollen germination, etc. On the contrary, eIF1A, eIF2, eIF4, and eIF5A are associated with interaction of plants with different abiotic stresses, such as high temperature, salinity, oxidative stress, etc. Similarly, eIF4E and eIF4G have roles in interaction with many viruses. Therefore, the translation initiation factors are important candidates for improving plant performance and adaptation. A large number of genes encoding eIFs can functionally be validated and utilized through genetic engineering approaches for better adaptability and performance of plants by inhibiting/minimizing or increasing expression of desired eIF(s).

The effects of a short (30 min) heat shock (HS) on plants subsequently grown under a salinity stress (SS, 200 mM NaCl) for 10 d were investigated in barley (Hordeum vulgare L.) cv. Tokak 157/37. The maximum temperature for HS allowing plant survival was 45 °C. The root length was significantly decreased by SS, whereas HS alone did not affect root growth. Interestingly, HS stimulated root elongation under SS. An osmotic adjustment was promoted in leaves by SS. On the contrary, HS increased the osmotic potential in leaves in the absence of SS, and partly counteracted the effect of SS in the HS+SS treatment. Cu/Zn-SOD, HvAPX, HvCAT2, HSP17, HSP18, and HSP90 were transcribed in leaves of HS-treated plants, but not in control plants. The HSP70 was constitutively transcribed in both the SS and control plants, but after HS, a shorter amplicon was also observed. The genes coding antioxidants, Cu/Zn-SOD, HvCAT2 and HvAPX, were differentially influenced by SS or HS+SS in the roots and leaves. In the roots, the mRNA content of BAS1, HvDRF1, HvMT2, and HvNHX1 increased after the HS treatment. In a recovery experiment in which plants were grown to maturity after HS and HS+SS stress exposure, the plant height increased and the time to maturity was reduced in comparison with SS. Our results show that HS could stimulate plant growth and reduce some of the negative effects of SS, and that it affected the transcription of several stress-related genes.

Two barley (Hordeum vulgare L.) cultivars, Czech spring cv. Amulet and Syrian landrace Tadmor, were subject to different salinity treatments: 1) the NaCl concentration was gradually increased from 0 (the control) to either 100 (a moderate salt stress) or 300 mM NaCl (a high salt stress), 2) the NaCl concentration was increased directly either from 0 to 300 mM NaCl or from 100 to 300 mM NaCl, and 3) a recovery when all variants were transferred back to control conditions and cultivated for seven additional days before sampling. The following parameters were determined: water saturation deficit (WSD), osmotic potential (ψ_s), leaf proline content, maximum quantum yield of photosystem (PS) II photochemistry (measured as variable to maximum chlorophyll a fluorescence ratio, F_v/F_m), and relative accumulation of dehydrins (DHN). Both quantitative and qualitative differences in dehydrins were found between NaCl-treated Amulet and Tadmor. A principal component analysis (PCA) of all experiment data revealed a differential ability of Amulet and Tadmor to recover after the 300 mM NaCl treatments indicating better salt tolerance in Tadmor. Correlation analyses have shown statistically significant correlations between WSD, ψ_s, proline, and DHN.

Lipase class 3 is part of the triacylglycerol lipase family involved in lipid degradation, esterification, and transesterification processes in plants. In this study, a lipase class 3 gene and promoter from oil palm (Elaeis guineensis Jacq.) were isolated and characterized by Northern blot, Southern blot, oil palm genome sequence, and transient expression GUS assay. The full-length lipase class 3 (FLL1) deduced polypeptide encoded 483 amino acids and was identical to that deduced from lipase (EgLip1) cDNA (GI: 409994625). It contained the lipase consensus sequence, GxSxG motif, and a putative catalytic triad and had a 3-dimensional protein model similar to that of a lipase from Giberella zeae with a 50 % identity. The Northern blot and reverse transcription polymerase chain reaction (RT-PCR) show that FLL1 was predominantly expressed in the mesocarp and the expression increased as fruits reached maturity. A lower expression was detected in germinated seedlings and especially in roots. The expression of FLL1 was also enhanced in the mesocarp of cold treated fruits. A high oil accumulation in the mesocarp during fruit development makes this tissue a suitable target for a genetic modification, hence the isolation of the FLL1 promoter. The transient expression of the β-glucuronidase (GUS) gene driven by the FLL1 promoter detected the GUS expression in mesocarp slices, especially in vascular bundles. This suggests the potential role of using the promoter as tool to direct the expression of a transgene to the mesocarp of transgenic oil palm.

The growth of the Cd-hyperaccumulator Solanum nigrum L. and its physiological responses to a short-term (7 d) Cd stress and to exogenous methyl jasmonate (MeJA) were investigated. Compared with the leaves of S. nigrum, the roots were more liable to Cd and showed a significantly decreased dry mass and increased malondialdehyde content. Cd accumulation in the shoots and roots of S. nigrum were proportional to the Cd concentration in the hydroponic solution. The application of a low concentration of MeJA (0.01 μM) significantly reduced the translocation/accumulation of Cd in both the shoots and roots compared with a 40 mg dm^-3 Cd treatment only. Moreover, 40 mg dm^-3 Cd significantly decreased the activity of leaf superoxide dismutase, but 0.01 μM MeJA restored it. MeJA also enhanced the activity of catalase in the leaves but showed no significant effect on peroxidase activity. The content of both endogenous jasmonic acid (JA) and MeJA in the leaves of S. nigrum increased with the increase of exogenous MeJA concentration.

The GhMYB9 encodes a R2R3 MYB transcription factor in the upland cotton (Gossypium hirsutum L.) genome. Our studies show that GhMYB9 predominantly expressed in flowers and fibers. To gain a better understanding of its regulatory mechanism, we isolated the 5'-flanking region of GhMYB9 which was 1 487 bp in length. The cis-acting element prediction shows that this region contained the basic structure of the core promoter elements (TATA-box, CAAT-box) and the transcription start site (TSS). Other motifs, such as defense and stress responsiveness (TC-rich repeats), anaerobic induction (ARE), and MYB binding sites involved in drought-inducibility (MBS), were also found. Histochemical assay shows that the GhMYB9 promoter governed β-glucuronidase (GUS) expression mainly in seeds, fibers, and flowers of transgenic cotton. Also, the activity of the promoter was induced by auxin in fibers of transgenic cotton. This is consistent with its transcript abundance in different tissues. A further deletion analysis confirms that a promoter region from -1 231 to -860 was required for auxin response. Our findings provide a useful reference for the understanding of the transcriptional regulation mechanism of the GhMYB9 gene.

Actinidia kolomikta (Rupr. & Maxim.) Maxim. leaves showed dramatic colour changes during plant growth phases, and we studied structure and optical properties of variegated leaves. Leaf surface cells were smooth, and there were no surface appendages (wax or trichomes) observed in variegated leaves. Palisade tissue cells in white and pink leaves were looser and contained relatively fewer chloroplasts. White leaves contained many intercellular spaces between the epidermal and mesophyll cells or within the palisade cell layer. Variegated leaves had three distinct radiation reflection patterns: a bright white area, a spotted pattern, and a polygonal pattern. Reflectance at 450-1100 nm from the adaxial surface of white leaves was greater than that of green leaves, but anthocyanin accumulation in pink leaves decreased the reflectance at 500-600 nm. When variegated leaves turned green, the reflectance at 500-600 nm increased. On abaxial surfaces, the reflectance of variegated leaves was similar to green leaves at 450-700 nm. In conclusion, reflection patterns and the formation of variegated leaves of A. kolomikta were significantly correlated with the leaf anatomy. The white and pink colours of leaves were a result of an internal reflection between air spaces and cells in the leaves, chlorophyll deficiency in palisade tissue, and anthocyanin accumulation. Variegated leaves turned green when the chlorophyll content in palisade tissue increased.

Phenylalanine ammonia lyase (PAL) is a key enzyme in the phenylpropanoid pathway responsible for biosynthesis of many secondary metabolites, such as anthocyanins, flavanols, and lignins. The objective of this work was to determine the effect of different rootstock/scion combinations on Prunus tree growth, PAL gene expression, and PAL activity in order to identify compatibility of different graft combinations. The study was performed with peach (P. persica cv. Chimarrita) grafted on two peach rootstocks (Capdeboscq and Tsukuba1) and one Japanese apricot (P. mume cv. Umezeiro). Two or three years after grafting, the growth of peach scion on Umezeiro was weak and finally the death of some trees occurred. The peach rootstocks induced vigorous growth without any tree loss through the three years of evaluation. However, PAL activity and expression of PAL encoding genes were higher in Umezeiro as compared to the other rootstocks. These results show that the differential gene expression together with the PAL activity is a promising strategy to predict graft incompatibility.

Two types of hairpin RNA (hpRNA) constructions were designed using a chimeric gene formed from two genes, the coat protein (CP) gene or the silencing suppressor gene, from the Cucumber mosaic virus (CMV) and the Potato virus Y (PVY_N), respectively; one type generated a single hairpin structure, whereas the other formed a two-hairpin structure. Four constructs, pDCPSH (double CP gene fragments, single hairpin), pDCPDH (double CP gene fragments, double hairpins), pHC2bSH (two silencing suppressor gene fragments, single hairpin), and pHC2bDH (two silencing suppressor gene fragments, double hairpins), were individually introduced into tobacco plants. A transcript analysis demonstrates that the small interference RNA (siRNA) processing efficiency was greater with the double-hairpin construct than with the single-hairpin construct, although the expression of their target genes were similar. A viral resistance assay shows that the transgenic tobacco plants effectively resisted a mixed infection of CMV and Potato virus Y (PVY^N) and that pDCPDH exhibited the highest silencing efficiency. The accumulation of siRNA in the inoculated transgenic plants expressing different hairpin structures was similar. A genetic analysis reveals that viral resistance in the transgenic plants was stably inherited from the T₀ to T₁ generation. A transcript analysis and a viral resistance assay indicate that the double-hairpin structure of the same target sequences tended to produce more siRNA before the virus inoculation and thus strengthened RNA-mediated viral resistance.

Extracellular ATP (eATP) has been considered as signalling compound to mediate several physiological processes. Here we show that eATP played a role in alleviating the salicylic acid (SA)-induced inhibition of cell viability and respiration in tobacco (Nicotiana tabacum L. cv. Bright Yellow-2) suspension cells. Exogenous SA at higher concentrations (0.05, 0.1, 0.3, 0.5, or 0.7 mM) caused a significant reduction in respiratory O₂ uptake or cell viability. The addition of exogenous ATP alleviated the SA-induced reductions in cell viability and respiration, but the effect was dependent on the concentrations of either exogenous SA or ATP. Further study shows that the alleviative effects of exogenous ATP were abolished by the addition of GdCl₃ (an inhibitor of Ca²⁺ channels) or EGTA (a Ca²⁺ chelator). These results suggest that this role of extracellular ATP could be related to a Ca²⁺ signalling pathway.

Coleus forskohlii (syn. Plectranthus barbatus) is a widely used medicinal plant and its main bioactive constituents are diterpenes forskolin and isoforskolin. The present study aimed to construct a cDNA library to identify expressed sequence tags related to terpene biosynthesis in C. forskohlii. We constructed a high quality normalized full-length cDNA library which reached the requirements (abundance, integrity, and library content) for isolating full-length genes. A total of 4 224 cDNA clones were sequenced and 2 394 unigenes were assembled with an average unigene size of 753 bp. A total of 2 100 (87.7 %) unigenes were functionally classified using gene ontologies, and 1 716 (71.7 %) unigenes were assigned to establish pathway associations in KEGG mapings. Notably, 64 unigenes putatively participated in the biosynthesis of secondary metabolites, in which 17 unigenes were identified that might be involved in the biosynthesis of the terpenoid backbone and monoterpenes, diterpenes, and triterpenes.

The effects of copper oxide nanoparticles (CuONPs) on germinating seedlings of green pea (Pisum sativum L.) were studied. The seedlings were grown in a half-strength Murashige and Skoog semisolid medium containing 0, 50, 100, 200, 400, and 500 mg dm^-3 CuONPs for 14 d under controlled growth chamber conditions. Exposures to 100, 200, 400, and 500 mg dm^-3 CuONPs significantly reduced plant growth (shoot and root lengths) and increased reactive oxygen species (ROS) generation and lipid peroxidation. Gene expression study using real-time polymerase chain reaction showed no significant change in the expression of genes coding CuZn-superoxide dismutase (CuZnSOD), catalase (CAT), and ascorbate peroxidase (APX) in shoots. However in roots, a significant increase in the expression of the CuZnSOD gene was observed under the exposures to 100, 200, 400, and 500 mg dm^-3 CuONPs, in the expression of the CAT gene under 100 and 200 mg dm^-3 CuONPs, and in the expression of APX under 200 and 400 mg dm^-3 CuONPs.

Tospoviruses are devastating plant viruses causing severe economic losses in a diverse range of crops worldwide. Here, we describe the development and evaluation of an RNA interference (RNAi) broad-spectrum virus resistance strategy based on a unique and short hairpin-RNA-generating construct (pNhpRNA). This construct was designed from a region of the nucleocapsid gene (N) of Tomato spotted wilt virus (TSWV) that showed a high sequence identity to the corresponding region in the related species Groundnut ringspot virus (GRSV) and Tomato chlorotic spot virus (TCSV). To test the effectiveness of the pNhpRNA construct, we developed a silencing reporter assay based on three fusion proteins in which the complete viral N gene sequence from each of the three tospoviruses was fused in frame to the green fluorescent protein (GFP) sequence. Co-agroinoculation of these constructs with pNhpRNA into leaves of Nicotiana benthamiana resulted in a strong silencing phenotype determined by GFP decay and suppression of the three N genes at the RNA and protein levels. To test the potential of the pNhpRNA construct to generate virus-resistant plants, we infiltrated the whole shoots of N. benthamiana with pNhpRNA. When these infiltrated plants were mechanically inoculated with the mentioned viruses 100, 70, and 60 % resistance phenotypes to TSWV, GRSV, and TCSV, respectively, were observed. The induction of a broad tospovirus resistance with a simple construct and a minimized off-target effect are the main contributions of pNhpRNA.

In order to identify target region amplification polymorphism (TRAP) markers linked to three physiological traits in wheat (Triticum aestivum L.), the segregating F₄ population from the cross between drought-sensitive (Yecora Rojo) and drought-tolerant (Pavon 76) genotypes was made. The parents and 150 F₄ families were evaluated phenotypically for drought tolerance using two irrigation treatments [2.5 and 7.5 m³(H₂O) m^-2(soil)]. Using 40 different TRAP primer combinations tested for polymorphism in parental and F4 family genotypes, the results revealed that quantitative trait locus (QTL) for chlorophyll content was associated with TRAP 5, TRAP 14, and TRAP 20 and explained 18, 16, and 23 % phenotypic variation, respectively. The genetic distance between chlorophyll content QTL and TRAP 5, TRAP 14, and TRAP 20 were 12.3, 19.8, and 13.6 cM, respectively. QTL for flag leaf senescence was associated with TRAP 2, TRAP 3, TRAP 15, and TRAP 16 and explained 33, 27, 28, and 23 % phenotypic variations, respectively. The genetic distance between flag leaf senescence QTL and TRAP 2, TRAP 3, TRAP 15, and TRAP 16 were 9.4, 14.7, 18.1, and 17.3 cM, respectively. QTL for cell membrane stability was associated with TRAP 8, TRAP 9, and TRAP 37 and explained 27, 30, and 24 % phenotypic variation, respectively. The markers TRAP 8, TRAP 9, and TRAP 37 had genetic distances of 17.0, 10.0, and 9.0 cM, respectively. Therefore, these TRAP markers can be used in breeding for drought tolerance in wheat.

A segregating F4 population from the cross between drought sensitive (Yecora Rojo) and drought tolerant (Pavon 76) genotypes was made to identify molecular markers linked to a wheat (Triticum aestivum L.) abscisic acid (ABA) content at two water regimes. The parents and 150 F₄ lines were evaluated phenotypically for drought tolerance using two irrigation treatments [0.25 and 0.75 m³(H₂O) m^-2(soil)]. Forty different target region amplification polymorphism (TRAP) primer combinations, 98 different sequence-related amplified polymorphism (SRAP) primer combinations, and 400 simple sequence repeat (SSR) primers were tested for polymorphism among the parental genotypes and the F₄ lines. Seven loci in the F₄ lines treated with the drought stress were identified. Single quantitative trait loci (QTLs) were located on chromosomes 1B, 2A, 3A, 5D, and 7B and each of them explained from 15 to 31 % of phenotypic variance with a LOD value of 7.2 to 15.7. Five QTLs were located on chromosome 4A and six QTLs on chromosome 5A. In control (well-watered) F₄ lines, two QTLs were mapped on chromosome 3B and one QTL on each chromosome 5B and 5D. Statistically the most significant groups of QTLs for the ABA content were identified in the regions of chromosomes 3B, 4A, and 5A mostly near to Barc164, Wmc96, and Trap9 markers. Therefore, these markers linked to QTLs for the drought-induced ABA content can be further used in breeding for drought tolerance in wheat.

Drought stress presents a considerable threat to the global crop production. As a dominant source of vegetarian diet, cereals and grain-legumes remain crucial to meeting the growing dietary demands worldwide. Therefore, breeding cultivars of these staple crops with enhanced drought tolerance stands to be one of the most sustainable solutions to enhance food production in changing climate. Given the context, a more focused survey of environment-defined germplasm sets is imperative to comprehend such adaptive traits. In parallel, uncovering the genetic architecture and the molecular networks that collectively contribute towards drought tolerance is urgently required through rationally combining large-scale genomics, proteomics, and metabolomics data. Also, attention needs to be directed to reasonably quantify the epistatic as well as environmental influences, thereby warranting deployment of analyses like metaquantitative trait loci (QTL) that encompass multiple environments and diverse genetic backgrounds. Further, innovative techniques like genomic selection (GS) and genome wide association study (GWAS) would help to capture the quantitative variation underlying drought tolerance. Equally importantly, integration of physiological traits-based techniques with ever-evolving 'omics' technologies and the new-generation phenotyping platforms will be of immense importance in advancing our existing knowledge about the genetically-complex and poorly-understood phenomena, such as plant drought response, and a deeper understanding would likely to provide a great impetus to the progress of crop breeding for drought tolerance.

The effects of proline and/or glycine betaine (GB) application on growth, photosynthetic pigments, H₂O₂ content, and activities of antioxidant enzymes in rice (Oryza sativa L. cv. KDML105) under salt stress were investigated. The H₂O₂ content and the activities of superoxide dismutase (SOD), glutathione reductase (GR), and ascorbate peroxidase (APX) but not catalase (CAT) increased under salinity. Under 160 mM NaCl, the CAT activity was maintained on the pre-stress level in the presence of proline, whereas in the presence of GB, the GR activity increased more than without GB application. A co-application of 30 mM proline and 1 mM GB did not reduce the increase in H₂O₂ caused by the NaCl stress more than applying each of the osmoprotectants and no synergistic effect on the antioxidant enzymes was observed. However, the application of both the osmoprotectants was the most effective in alleviating degradation of photosynthetic pigments.

Strawberry (Fragaria × ananassa) contains anthocyanins which are important secondary metabolites and key contributors to the antioxidant capacity and nutritional value of the fruit. Anthocyanin biosynthetic genes have been identified. However, the detailed mechanism responsible for anthocyanin accumulation and regulation of biosynthetic genes during strawberry fruit ripening remain unclear. In the present study, we examined the effect of a Fragaria × ananassa myeloblastosis 1 homolog, FaMYB1, on anthocyanin accumulation in the strawberry fruit receptacle. Expression analysis shows that FaMYB1 transcripts increased in response to irradiance but not to abscisic acid treatments. Down-regulation of FaMYB1 was achieved in planta using Agrobacterium-mediated RNA interference (RNAi). As a result, FaMYB1-RNAi fruits exhibited a significant increase in anthocyanin content. Conversely, overexpression of FaMYB1 resulted in a decrease in anthocyanin content. Overexpression of FaMYB1 also significantly reduced expression of genes encoding anthocyanidin synthase and flavonoid glycosyltransferase, whereas down-regulation of FaMYB1 resulted in a significant decrease in the amount of transcripts of leucoanthocyanidin reductase. These data suggest that FaMYB1 might negatively control anthocyanin biosynthesis in the strawberry fruit at the branching-point of anthocyanin/proanthocyanidin biosynthesis.

Most perennial and winter annual temperate grasses have a vernalization requirement (VR) for flowering, that is, they require a cold period before they can flower in response to long days. From a F1 mapping population of the outbreeding perennial forage grass Festuca pratensis Huds. (meadow fescue) previously used to map several quantitative trait loci (QTLs) for VR, we produced two F2 populations divergently selected for high or low VR. The two populations were characterised for flowering behaviour and gene expression of VRN1 as well as other MADS-box genes with a putative function in the induction of flowering. Expression of FpVRN1 and the VRN1-like genes FpMADS2 and FpMADS3 was associated with flowering but the response of gene expression to vernalization differed between genes and populations. The expression of the SVP-like genes FpMADS10 and FpMADS16 was not affected by vernalization and did not differ between the two F2 populations.

Litchi (Litchi chinensis Sonn.) is an important tropical and subtropical evergreen woody fruit tree, and it has been shown that nitric oxide (NO) could promote litchi flowering. NO responsive genes of litchi (cv. Nuomici) primordia were identified through a suppression subtractive hybridization (SSH) library screen. We obtained 1 563 expressed sequences tags (ESTs) that were enriched in the NO treated inflorescence primordia. We then used a reverse Northern analysis to identify 728 true NO responsive ESTs, the sequences of which have been further analyzed. They represent 70 litchi unique genes that could be classified into 9 categories: 14 % of them were involved in transport facilitation, 7 % in transcription regulation, 9 % in stress response, 7 % in sugar metabolism, 9 % in secondary metabolism, 10 % in intracellular signalling, and 44 % in other metabolism, whereas 11 % were genes with unknown functions, and 7 % were genes with no hit found. Next, we performed a real-time quantitative polymerase chain reaction (RT-qPCR) to determine the expression of selected candidate genes during a time-course of NO treatment and of normal floral tissue development.