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Heterologous expression of a novel Poa pratensis gibberellin 2-oxidase gene, PpGA2ox, caused dwarfism, late flowering, and increased chlorophyll accumulation in ArabidopsisP.-H Tan, L. Zhang, S.-X. Yin, K. TengBiologia plantarum 62:462-470, 2018 | DOI: 10.1007/s10535-018-0788-1 Gibberellin 2-oxidases (GA2oxs) irreversibly convert bioactive gibberellins (GAs) and their immediate precursors into inactive GAs via 2-β hydroxylation and so regulate gibberellin content in plants. However, to the best of our knowledge, little has been known about the GA2oxs and its function in cool season turfgrass Poa pratensis. In this study, rapid amplification of cDNA end (RACE) was employed to isolate PpGA2ox from P. pratensis. The open reading frame of PpGA2ox was 1 047 bp in length, corresponding to 348 amino acids. PpGA2ox was localized in both nucleus and cytoplasm. The expression of PpGA2ox could be up-regulated by 10 μM gibberellic acid, 5 μM methyl jasmonate, or 10 μM indole-3-acetic acid. In addition, its native promoter could drive GUS expression in both leaf apex and shoot apical region. Moreover, overexpression of PpGA2ox in Arabidopsis led to GA-deficiency leading to dwarf phenotype, delayed flowering time, and increased chlorophyll content. Our study suggests that PpGA2ox could be a candidate gene for breeding new cultivars of P. pratensis. |
The role of plant cation/proton antiporter gene family in salt toleranceQ. Jia, C. Zheng, S. Sun, H. Amjad, K. Liang, W. LinBiologia plantarum 62:617-629, 2018 | DOI: 10.1007/s10535-018-0801-8 Salinity is one of the major abiotic constraints to agriculture. The physiological and molecular mechanisms of salt tolerance have been studied in plants for many years. The regulation of osmosis and ion homeostasis is crucial. A lot of important components involved in plant responses to salt stress have been identified. Among them, ion transporters and channels take an essential role in ion homeostasis, mainly for Na+, Cl-, and K+. Until now, many cation antiporters important for salt tolerance in plants have been characterized. Among them, the monovalent cation/proton antiporters (CPA) family is one of the most important families, including sodium proton exchangers (NHXs), K+-efflux antiporters (KEAs), and cation/H+ exchangers (CHXs). Here, the current knowledge of the plant CPA family in responses to salt stress was reviewed. The regulation mechanisms were also included and discussed. |
Effects of zinc oxide nanoparticles on the growth, photosynthetic traits, and antioxidative enzymes in tomato plantsX. P. Wang, Q. Q. Li, Z. M. Pei, S. C. WangBiologia plantarum 62:801-808, 2018 | DOI: 10.1007/s10535-018-0813-4 With the dramatic increase in nanotechnologies, it has become probable that biological systems will be exposed to excess of nanoparticles (NPs). However, the impact of NPs on plants, remains to be explored. The aim of this research was to determine the effects of ZnO NPs on tomato (Solanum lycopersicum L.) plants. Plant growth, photosynthetic characteristics, chlorophyll fluorescence parameters, and activities of antioxidative enzymes were measured in 35-d-old plants. The ZnO NP treatments significantly inhibited tomato root and shoot growth, decreased the content of chlorophylls a and b, and reduced photosynthetic efficiency and some other chlorophyll fluorescence parameters in a concentration-dependent manner. However, the supernatant of ZnO NP suspensions did not affect growth of tomato, despite the presence of small amounts of Zn2+. Taken together, these results suggest that toxic effects on tomato plants were from ZnO NPs, not from Zn2+ released into the solution; toxicity was likely caused by reduced chlorophyll content and damaged photochemical system, which in turn limited photosynthesis and led to the reduction in biomass accumulation. Also, ZnO NPs enhanced the transcription of genes related to antioxidant capacity, suggesting that ZnO NPs could enhance the defence response by increasing activities of antioxidant enzymes. |
Mobilization of the Tetu1 transposable element of Helianthus annuus: evidence for excision in different developmental stagesM. Fambrini, C. PugliesiBiologia plantarum 61:55-63, 2017 | DOI: 10.1007/s10535-016-0655-x The tubular ray flower (turf) mutant of sunflower is characterized by a switch of ray flowers from zygomorphic to near-actinomorphic disc flowers. In sunflower, floral symmetry of ray and disc flowers is specified by the activity of members of a CYCLOIDEA (CYC) gene family. The turf mutant is generated by the insertion of a CACTA-like transposable element (TE), named Transposable element of turf1 (Tetu1), in the coding sequence of the HaCYC2c gene. The TEinsertion changes the reading frame of turf-HaCYC2c for the encoded protein and leads to a premature stop codon. Tetu1 is a non-autonomous version of a CACTA TEcarrying the minimum sequences necessary for transposition in the presence of autonomous elements in the sunflower genome. In the previous analysis, performed in more than 11 000 plants homozygous for the turf-HaCYC2c allele, the absence of chimerism and the segregation rate of derived-progenies from reverted phenotypes suggest that Tetu1 transpositions are restricted to a time shortly before and/or during meiosis. Here, we report the analysis of F5 and F6 progenies, derived from an F4 progeny of the cross turf × Chrysanthemoides2, where plants with a chimeric inflorescence were detected. Tetu1 showed active excision in all progenies taken into consideration and named High Frequency of Tetu1 Transposition (HFTT). Within a total of 449 plants, Tetu1 excision generated a 13.81 % of non-chimeric revertants but also a 5.12 % of plants with somatic sectors of variable size in the outmost whorl of the inflorescence. These unexpected results suggest variations in tissue specificity and time of TEexcision. The excision of Tetu1 was confirmed by DNA molecular screening of non-chimeric and chimeric revertants and transcription analysis of the HaCYC2c gene. In HFTT progenies, sequence analyses excluded significant DNA changes with respect to the original Tetu1 transposon as well as to the adjacent 5'- and 3'-TE regions. Genetic and epigenetic regulatory mechanisms were proposed to explain the time and frequency of Tetu1 transposition in HFTT progenies. |
Tolerance to soil water stress by Oryza sativa cv. IR20 was improved by expression of Wsi18 gene locus from Oryza nivaraR. Kaur, A. Chakraborty, R. K. Bhunia, S. K. Sen, A. K. GhoshBiologia plantarum 62:129-139, 2018 | DOI: 10.1007/s10535-017-0742-7 Wild rice genotypes are rich in genetic diversity. This has potential to improve agronomic rice by allele mining for superior traits. Late embryogenesis abundant (LEA) proteins are often associated with desiccation tolerance and stress signalling. In the present study, a group 3 LEA gene, Wsi18 from the wild rice Oryza nivara was expressed under its own inducible promoter element in stress susceptible cultivated indica rice (cv. IR20). The resulting transgenic plants cultivated in a greenhouse showed enhanced tolerance to soil water deficit. Transgenic plants had higher grain yield, plant survival rate, and shoot relative water content compared to wild type (WT) IR20. Cell membrane stability index, proline and soluble sugar content were also greater in transgenic than WT plants under water stress. These results demonstrate the potential for improving SWS tolerance in agronomically important rice cultivar by incorporating Wsi18 gene from a wild rice O. nivara. |
Mechanisms of heat sensing and responses in plants. It is not all about Ca2+ ionsM. Sajid, B. Rashid, Q. Ali, T. HusnainBiologia plantarum 62:409-420, 2018 | DOI: 10.1007/s10535-018-0795-2 The climate shift has resulted in frequent heat waves, which cause damaging effects on plant growth and development at different life stages. All cellular processes in plants are highly sensitive to a high temperature. The plasma membrane heat receptors usually sense temperature variations directly or via a change in membrane fluidity. The accumulation of damaged proteins and reactive oxygen species also aid in heat perception. Calcium ions and heat sensors transfer signals to transcription factors through a series of signaling cascades. The heat stress transcription factors (HSFs) effectively regulate expression of heat induced genes. The members of the heat shock transcription factor A1 (HsfA1s) family are master regulators of a heat stress response. Different HSFs interact with each other at different levels and simultaneously operate heat induced gene expression. Interaction of HSFs with each other on multiple levels provides chances for manipulation to improve plant heat stress tolerance. |
Expression and characteristics of rice xylanase inhibitor OsXIP, a member of a new class of antifungal proteinsR.-J. Sun, Y. Xu, C.-X. Hou, Y.-H. Zhan, M.-Q. Liu, X.-Y. WengBiologia plantarum 62:569-578, 2018 | DOI: 10.1007/s10535-018-0787-2 It has been hypothesized that xylanase inhibitors play important roles in plant defense against microbial pathogens. Currently, there is little information available about xylanase inhibitor OsXIP in rice and its gene expression. We cloned a xylanase inhibitor gene OsXIP from rice (Oryza sativa L. cv. Nipponbare) genomic DNA. To determine the function of OsXIP, we generated OsXIP-overexpressing transgenic rice plants. The transgenic plants had significantly higher OsXIP expression and showed enhanced defense response to Magnaporthe oryzae compared to the wild-type plants. The results also showed that the increased OsXIP expression was accompanied by the up-regulation of pathogenesisrelated genes. To clarify the OsXIP expression pattern, a ProOsXIP::GUS vector was constructed and transgenic plants were obtained. GUS staining results revealed that OsXIP showed organ-specific expressions in rice plants. OsXIP was primarily expressed in the roots and in the veins, but it was weakly expressed in the leaves. Analyses of the OsXIP expression in response to biotic and abiotic stresses indicated that it was drastically induced by biotic stresses and methyl jasmonate treatment. OsXIP, a member of a new class of antifungal proteins, may function as a barrier that prevents the cell wall degradation by xylanases excreted by fungal pathogens. The OsXIP was found to be a stressresponsive gene and it could take part in plant defense via a JA-mediated signaling pathway. |
Knockout mutants of Arabidopsis thaliana β-galactosidase. Modifications in the cell wall saccharides and enzymatic activitiesM. Moneo-Sánchez, L. Izquierdo, I. Martín, J. Hernández-Nistal, L. Albornos, B. Dopico, E. LabradorBiologia plantarum 62:80-88, 2018 | DOI: 10.1007/s10535-017-0739-2 This work studied the six β-galactosidases (BGALs) of the subfamily a1 of Arabidopsis, that have been proposed to play important roles in the cell wall remodelling during plant development, although their precise functions are still unknown. Knockout mutants bgal1, bgal2, bgal3, bgal4, bgal5, and bgal12 of Arabidopsis and their wild type (WT) plants were analysed to determine their morphology and composition of their cell walls. The gas chromatography and the Fourier transform infrared spectroscopy revealed differences between the mutants and their WT such as in the proportions of glucose, galactose, or xylose in bgal2 and bgal4 and in cell walls polysaccharides in bgal1, bgal3, and bgal5. However, these slight changes did not result in morphological variations during plant development. None of the mutant seedlings displayed a clear reduction in β(1,4)-galactan content, analysed by immunolocalization. The absence of significant phenotypic changes in the β-galactosidase subfamily a1 mutants could indicate possible β-galactosidases functional redundancy. Future studies will focus on the construction of multiple mutants that help to establish the precise function of each member of the β-galactosidase subfamily a1. |
Comprehensive isolation and expression analysis of the flavonoid biosynthesis-related genes in Tricyrtis spp.M. Otani, Y. Kanemaki, F. Oba, M. Shibuya, Y. Funayama, M. NakanoBiologia plantarum 62:684-692, 2018 | DOI: 10.1007/s10535-018-0802-7 Tricyrtis spp., which belong to the family Liliaceae, produce unique flowers, whose tepals have many reddish-purple spots. Although elucidation of a molecular mechanism of tepal spot formation and molecular breeding for flower colour alteration are desired for Tricyrtis spp., only one flavonoid biosynthesis-related gene, TrCHS encoding chalcone synthase (CHS), has been isolated so far. In the present study, comprehensive isolation and expression analysis of the other flavonoid biosynthesis-related genes were carried out in Tricyrtis sp. Six genes (TrCHI, TrF3H, TrF3'H, TrFLS, TrDFR, and TrANS) encoding biosynthetic enzymes chalcone isomerase (CHI), flavanone-3-hydroxylase (F3H); flavonoid 3'-hydroxylase (F3'H), flavonol synthase (FLS), dihydroflavonol 4-reductase (DFR), and anthocyanin synthase (ANS) as well as three genes (TrMYB1, TrbHLH2 and TrWDR) encoding transcription factors myeloblastosis 1 (MYB1), basic helix-loop-helix (bHLH), and WD40 repeats (WDRs) were newly isolated. Phylogenetic analysis showed that each isolated gene was classified into the monocotyledonous clade. Deduced amino acid sequences of DFRs showed that TrDFR has no substrate specificity. "Early" genes in the flavonoid biosynthetic pathway (TrCHS, TrCHI, and TrF3H) were constantly expressed in tepals during flower development, whereas expression of "late" genes (TrF3'H, TrFLS, TrDFR, and TrANS) varied with the flower developmental stage. Expression patterns of the late genes were mostly correlated with those of transcriptional factor genes, indicating that the late genes may be under the control of a transcription factor complex consisted of TrMYB1, TrbHLH2, and TrWDR. Accumulation of anthocyanins in tepals occurred slightly after transcriptional upregulation of the late genes. Results obtained in the present study may be valuable for further studies on flower colour and flower colour pattern in Tricyrtis spp. |
Identification, characterization, and expression of the SWEET gene family in Phalaenopsis equestris and Dendrobium officinaleT. Wang, Z. Song, W. L. Meng, L. B. LiBiologia plantarum 62:24-32, 2018 | DOI: 10.1007/s10535-017-0750-7 Sugars are important molecules that function not only as primary metabolites, but also as nutrients and signal molecules in plants. The sugar transport protein genes family SWEET has been recently identified. The availability of the Dendrobium officinale and Phalaenopsis equestris genome sequences offered the opportunity to study the SWEET gene family in this two orchid species. We identified 22 and 16 putative SWEET genes, respectively, in the genomes of D. officinale and P. equestris using comprehensive bioinformatics analysis. Based on phylogenetic comparisons with SWEET proteins from Arabidopsis and rice, the DoSWEET and PeSWEET proteins could be divided into four clades; among these, clade II specifically lacked PeSWEETs and clade IV specifically lacked DoSWEETs, and there were orthologs present between D. officinale and P. equestris. Protein sequence alignments suggest that there is a predicted serine phosphorylation site in each of the highly conserved MtN3/saliva domain regions. Gene expression analysis in four tissues showed that three PeSWEET genes were most highly expressed in the flower, leaf, stem, and root, suggesting that these genes might play important roles in growth and development in P. equestris. Analysis of gene expression in different floral organs showed that five PeSWEET genes were highly expressed in the column (gynostemium), implying their possible involvement in reproductive development in this species. The expression patterns of seven PeSWEETs in response to different abiotic stresses showed that three genes were upregulated significantly in response to high temperature and two genes were differently expressed at low temperature. The results of this study lay the foundation for further functional analysis of SWEET genes in orchids. |
Allantoin accumulation in response to increased growth irradiance in Arabidopsis thalianaS. Irani, J. M. Lobo, G. R. Gray, C. D. ToddBiologia plantarum 62:181-187, 2018 | DOI: 10.1007/s10535-017-0747-2 Excess radiation is one of frequent natural environmental stresses that plants have to cope with on a daily basis. Therefore, plants have evolved many short- and long-term mechanisms to acclimate to high irradiance and tolerate it. Ureides, generated from purine degradation, have been proposed as compounds involved in environmental stress responses, including altered irradiance. In the present study, high irradiance was used to investigate ureide content and gene expression in Arabidopsis thaliana. Arabidopsis plants shifted to high irradiance showed high content of a specific ureide compound, allantoin. The accumulation of allantoin was associated with increased expression of uricase, an enzyme involved in its production. When an Arabidopsis mutant (aln-3), which constitutively accumulates elevated amounts of allantoin, was exposed to high irradiance, mutant plants demonstrated enhanced tolerance to the stress conditions compared to the wild-type plants. Our results provide evidence that accumulation of the allantoin might contribute in plants response to increased growth irradiance. |
Comparative analysis of DNA methylation changes in two contrasting wheat genotypes under water deficitA. Kaur, A. Grewal, P. SharmaBiologia plantarum 62:471-478, 2018 | DOI: 10.1007/s10535-018-0786-3 DNA methylation is one of the epigenetic mechanisms regulating gene expression in plants in response to environmental conditions. In this study, analysis of methylation patterns was carried out in order to assess the effect of water stress in two contrasting wheat genotypes using methylation-sensitive amplified polymorphism (MSAP). The results revealed that demethylation was higher in drought-tolerant genotype (C306) as compared to drought-sensitive genotype (HUW468) after experiencing drought stress. Comparisons of different MSAP patterns showed a high percentage of polymorphic bands between tolerant and susceptible wheat genotypes (from 74.79 % at anthesis to 88.89 % at tillering). Furthermore, differential DNA methylation in roots and leaves also revealed tissue-specific methylation of genomic DNA. Interestingly, 54 developmental stage-specific bands and 23 bands that were found contrasting between these two wheat genotypes were detected. Furthermore, a few sites with stable DNA methylation differences were identified between drought-tolerant and drought-sensitive cultivars, thus providing genotype-specific epigenetic markers. These results not only provide data on differences in DNA methylation changes but also contribute to dissection of molecular mechanisms of drought response and tolerance in wheat. |
Sulfur dioxide acts as an antioxidant and delays programmed cell death in wheat aleurone layers upstream of H2S and NO signaling pathwaysK.-K. Sun, D.-B. Zhu, G.-F. Yao, K.-D. Hu, H. ZhangBiologia plantarum 62:809-816, 2018 | DOI: 10.1007/s10535-018-0796-1 Sulfur dioxide is a widespread air pollutant and it also acts as a signaling molecule in various processes in mammals. However, the role of SO2 in programmed cell death (PCD) in plants is unclear. Here we studied the role of SO2 in gibberellin (GA)-treated wheat aleurone layers. The results showed that 100 μM SO2 donor (NaHSO3/Na2SO3) could effectively delay PCD and inhibit the coalescence of small protein storage vacuoles (PSVs) in aleurone cells treated with GA. Also, SO2 could reduce the accumulation of hydrogen peroxide and superoxide anion in GA-treated aleurone layers. In this process, SO2 could sustain higher activities of catalase, guaiacol peroxidase, ascorbate peroxidase, and superoxide dismutase and lower activities of lipoxygenase and polyphenol oxidase by comparing with GA alone. In addition, an induction of endogenous H2S and NO was observed in SO2-treated aleurone layers. The application of NO scavenger cPTIO could accelerate PCD in SO2 or H2S treated aleurone cells, suggesting that NO alleviated PCD by acting downstream of SO2 and H2S. In conclusion, these results imply that SO2 could delay PCD in GA-treated wheat aleurone layers by enhancing cellular antioxidative capacity and H2S/NO signals act downstream of SO2. |
Freezing tolerance of chickpea: biochemical and molecular changes at vegetative stageÖ. Arslan, F. Eyidoğan, Y. EkmekçiBiologia plantarum 62:140-148, 2018 | DOI: 10.1007/s10535-017-0760-5 The aim of this study was to find a correlation between the freezing tolerance of three chickpea (Cicer arietinum L.) cultivars (İnci, Iºik-05, and Sari-98) and their wild relative C. echinospermum and physiological responses. Chickpea plants (15-d-old) were subjected to cold acclimation (CA) (10 °C for 7 d), freezing (-3 or -5 °C for 2 h), and subsequent rewarming (25 °C for 7 d). In two separate experiments with three replications, we determined growth, water status, photosystem 2 photochemical activity, photosynthetic pigments, H2O2, malondialdehyde, and proline content, relative leakage ratio, antioxidant enzyme activities, and gene expressions in cultivars different in freezing tolerance. Freezing temperatures adversely affected all the physiological parameters of all cultivars. Rewarming did not lead to complete recovery. The cultivar İnci was more tolerant to the freezing temperatures than others. |
Identification of the genes involved in heterotrimeric G-protein signaling in mulberry and their regulation by abiotic stresses and signal moleculesC. Y. Liu, Y. Z. Xu, W. Fan, D. P. Long, B. N. Cao, Z. H. Xiang, A. C. ZhaoBiologia plantarum 62:277-286, 2018 | DOI: 10.1007/s10535-018-0779-2 Heterotrimeric guanine-nucleotide-binding proteins (G-proteins) play important roles in signal transduction and regulate responses to various stresses. Although G-protein signaling pathways have been extensively identified and characterized in model plants, there is little knowledge in non-model and especially in woody plants. Mulberry is an economically and ecologically important perennial tree, which is adaptable to many environmental stresses. In this study, we identified and cloned six G-protein genes including one Gα, one Gβ, two Gγ, one RGS (regulator of G-protein signaling protein) and one RACK1 (receptor for activated C kinase 1) involved in G-protein signaling. Sequence and phylogenetic analysis revealed that Morus G-proteins are evolutionarily conserved compared with those of other plants. A real-time quantitative reverse transcription polymerase chain reaction analysis showed that Morus G-protein signaling genes were ubiquitously but differentially expressed in various tissues. The expression of all of these genes was affected by abiotic stresses and signal molecules, which indicated that Morus G-protein signaling may be involved in environmental stress and defense responses. |
The functions of plant cation/proton antiportersW. Dong, D.-L. Li, N.-W. Qiu, Y.-G. SongBiologia plantarum 62:421-427, 2018 | DOI: 10.1007/s10535-018-0790-7 The cation/H+ exchange is a basic process in transmembrane transport. The acquisition of genome sequences has now established that plants possess genes encoding a large number of cation/proton antiporter 1 (CPA1) proteins, few of which have been characterized with respect to their contribution to ion homeostasis. The CPA1s comprise plasma membrane, vacuolar, and endosomal forms, and they have been identified as important for a salinity tolerance. They are, however, also involved in both the control of cellular pH and K+ homeostasis, and regulate processes over a wide range of physiological events, from vesicle trafficking to development. |
Nitrogen metabolism-related enzymes in Mesembryanthemum crystallinum after Botrytis cinerea infectionE. Gajewska, E. Surówka, A. Kornas, E. Ku¼niakBiologia plantarum 62:579-587, 2018 | DOI: 10.1007/s10535-018-0791-6 We compared C3 and CAM (crassulacean acid metabolism) states in Mesembryanthemum crystallinum, a facultative CAM species, with respect to the involvement of phosphoenolpyruvate carboxylase (PEPC) and nitrogen metabolismrelated enzymes in plant response to Botrytis cinerea infection. The enzyme activities were monitored both in pathogeninoculated 2nd leaf pair and non-inoculated 3rd leaf pair. The control activities of most studied enzymes were dependent on the mode of photosynthesis. Compared to C3 plants, those performing CAM exhibited higher PEPC, nitrate reductase (NR), and deaminating glutamate dehydrogenase (NAD-GDH) activities but lower glutamine synthetase (GS) and alanine aminotransferase (ALT) activities. Regardless of the mode of photosynthetic carbon assimilation, the plants responded to infection with enhancement of PEPC and inhibition of NR activities in the inoculated leaves. Whereas the activity of GS remained unaffected, those of all glutamate-yielding enzymes, namely ferredoxin-dependent glutamate synthase (Fd-GOGAT), aspartate aminotransferase (AST), ALT, and aminating glutamate dehydrogenase (NADHGDH) were altered after infection. However, the time-course and extent of the observed changes differed in C3 and CAM plants. In general, CAM plants responded to infection with an earlier increase in PEPC and Fd-GOGAT activities as well as later inhibition of NR activity. Contrary to C3 plants, in those performing CAM the activities of PEPC, Fd-GOGAT, NADH-GDH, and AST in the non-inoculated 3rd leaf pair were similarly influenced by infection as in leaves directly inoculated with the pathogen. This implies that the local infection induced an alteration of carbon/nitrogen status in healthy upper leaves. This reprogramming resulting from changes in PEPC and nitrogen metabolism-related enzymes was C3- and CAM-specific. |
Cloning and characterization of four TpSnRK2s from dwarf Polish wheatY. Jiang, Y. Wang, Z. Huang, H. Kang, L. Sha, X. Fan, H. Zhang, S. Gao, Y. Zhou, X. YuBiologia plantarum 61:601-610, 2017 | DOI: 10.1007/s10535-017-0719-6 Protein phosphorylation/dephosphorylation is a major signalling event induced by abiotic stresses in plants. Sucrose nonfermenting 1-related protein kinase 2 (SnRK2) plays important roles in response to osmotic stress. In the present study, four SnRK2s, TpSnRK2.1/3/7/8, were cloned and characterized from Triticum polonicum L. (dwarf Polish wheat, DPW, AABB). All of these were individually located on 2AL, 1AL, 2AL, and 5BL. Two spliced isoforms of TpSnRK2.8 (TpSnRK2.8a and TpSnRK2.8b) were observed. TpSnRK2.1 and TpSnRK2.3 were classified into the group II; TpSnRK2.7 was classified into the group I; and TpSnRK2.8a/b were classified into the group III. Expression patterns revealed that TpSnRK2.1 responded to cold, NaCl, polyethylene glycol (PEG), and abscisic acid (ABA) in both roots and leaves; TpSnRK2.3 was strongly regulated by cold, NaCl, and ABA in both roots and leaves, and by PEG in roots; TpSnRK2.7 was induced by NaCl and PEG in roots, but was not activated by ABA; and TpSnRK2.8s were significantly activated by cold, NaCl, PEG, and ABA in both roots and leaves. From the above results, we inferred that TpSnRK2.1/3/8 may participate in the responses to environmental stresses in ABA-dependent signal transduction pathway but TpSnRK2.7 is possibly involved in responses to environmental stresses in a non-ABA-dependent manner. They play important roles in specific tissues under different stresses. |
Assessment of reference genes for real-time quantitative PCR normalization in Ilex paraguariensis leaves during droughtR. M. Acevedo, E. H. Avico, O. A. Ruiz, P. A. SansberroBiologia plantarum 62:89-96, 2018 | DOI: 10.1007/s10535-017-0754-3 Reverse transcription of RNA followed by real-time quantitative PCR (qPCR) is to date the most reliable method for gene expression studies. However, to control the errors introduced along the numerous experimental procedures, it requires a normalization using internal reference genes with stable expression. To address this issue, nine candidate reference genes were investigated in Ilex paraguariensis leaves subjected to water stress. To facilitate the selection, we analysed the real-time qPCR data with three different software programs. The obtained results support the conclusion that RNA polymerase associated protein rtf1 homolog (RTF) combined with any of the following pairs is the most suitable triad of genes to compute a normalization factor: elongation factor 1-alpha + tubulin alpha chain (EF1a + α-Tub), actin + cyclophilin 38 (ACT + CYP38), or cyclophilin 38 + vacuolar protein sorting-associated protein 18 homologs (CYP38 + VPS). Our analysis constitutes the first in-depth study to identify the appropriate reference genes for the quantification of transcription in Ilex paraguariensis leaves during drought and provides essential information for further gene expression studies in this tree species. |
The complete chloroplast genome sequence of Pseudoroegneria libanotica, genomic features, and phylogenetic relationship with Triticeae speciesD. D. Wu, L. N. Sha, C. Tang, X. Fan, Y. Wang, H. Y. Kang, H. Q. Zhang, Y. H. ZhouBiologia plantarum 62:231-240, 2018 | DOI: 10.1007/s10535-017-0759-y Pseudoroegneria libanotica is an important herbage diploid species possessing the St genome. The St genome participates in the formation of nine perennial genera in Triticeae (Poaceae). The whole chloroplast (cp) genome of P. libanotica is 135 026 bp in length. The typical quadripartite structure consists of one large single copy of 80 634 bp, one small single copy of 12 766 bp and a pair of inverted regions (20 813 bp each). The cp genome contains 76 coding genes, four ribosomal RNA and 30 transfer RNA genes. Comparative sequence analysis suggested that: 1) the 737 bp deletion in the cp of P. libanotica was specific in Triticeae species and might transfer into its nuclear genome; 2) hot-spot regions, indels in intergenic regions and protein coding sequences mainly led to the length variation in Triticeae; 3) highly divergence regions combined with negative selection in rpl2, rps12, ccsA, rps8, ndhH, petD, ndhK, psbM, rps3, rps18, and ndhA were identified as effective molecular markers and could be considered in future phylogenetic studies of Triticeae species; and 4) ycf3 gene with rich cpSSRs was suitable for phylogeny analysis or could be used for DNA barcoding at low taxonomic levels. The cpSSRs distribution in the coding regions of diploid Triticeae species was shown for the first time and provided a valuable source for developing primers to study specific simple sequence repeat loci. |
Cadmium tolerant and sensitive wheat lines: their differences in pollutant accumulation, cell damage, and autophagyJ. Y. Yue, X. J. Wei, H. Z. WangBiologia plantarum 62:379-387, 2018 | DOI: 10.1007/s10535-018-0785-4 Cadmium (Cd) is a major abiotic stressor that affects plant growth and reduces the productivity of field crops. Here, we examined the ultrastructural, physiological, and molecular changes in three wheat cultivars [Sumai 3, Jingdong 8 (JD 8), and Nannong 9918 (9918)] in response to different concentrations of Cd (0, 10, 50, and 100 μM) in 1/4 Hoagland nutrient solution. The results showed that JD 8 contained the lowest shoot Cd content and the highest root Cd content among the three cultivars at higher Cd concentrations and so JD 8 was proposed to be a relatively Cd-tolerant cultivar. Next, the stress responses of JD 8 and 9918 were compared. Cadmium reduced root growth and size and number of the leaves, inhibited root hair development, and promoted leaf cell death. The result of trypan blue staining showed that the dead leaf cells induced by Cd stress gradually emerged in the xylem, supporting the hypothesis that cell death could restrict Cd transport. The Cd-induced deterioration of the leaf ultrastructure led to the complete disorganization of the chloroplasts, which had lower amounts of transitory starch and an increased number of osmiophilic granules compared to those in the untreated controls. Autophagy-related genes and autophagy in the leaves were induced by Cd stress. At the same concentration and Cd treatment time, the Cd-tolerant genotype JD 8 exhibited less toxic symptoms compared to the Cd-sensitive genotype 9918. The results of this study provide insights into the ultrastructural and physiological damages induced by Cd stress, which may help in selecting Cd-tolerant wheat cultivars. |
Ferulic acid pretreatment alleviates heat stress in blueberry seedlings by inducing antioxidant enzymes, proline, and soluble sugarsZ.-Y. Cheng, L. Sun, X.-J. Wang, R. Sun, Y.-Q. An, B.-L. An, M.-X. Zhu, C.-F. Zhao, J.-G. BaiBiologia plantarum 62:534-542, 2018 | DOI: 10.1007/s10535-018-0772-9 Heat causes stress in blueberry; therefore, the present study aimed to investigate whether exogenous ferulic acid (FA) might protect plants against heat stress and to analyze possible mechanisms underlying such protection. Blueberry (Vaccinium corymbosum) seedlings were pretreated with 0.6 mM FA for 1 d and then kept at normal (25/20 °C) or elevated (39/30 °C) temperatures for 3 d. One day of FA pretreatment increased transcriptions of genes encoding iron superoxide dismutase, cytoplasmic copper/zinc superoxide dismutase, guaiacol peroxidase, ascorbate peroxidase, and glutathione reductase and elevated content of proline and soluble sugars in leaves. When the FA-pretreated blueberries were exposed to heat, transcriptions of these genes and content of proline and soluble sugars were higher than after heat treatment alone. Under heat, FA pretreatment also enhanced transcriptions of genes encoding chloroplast copper/zinc superoxide dismutase, catalase, glutathione peroxidase, monodehydroascorbate reductase, and dehydroascorbate reductase. This corresponds with increased activities of superoxide dismutase and glutathione peroxidase and is consistent with elevated content of ascorbate and glutathione in the FA-pretreated and heat-stressed blueberries. Compared with heat treatment alone, the combination of FA pretreatment and heat enhanced content of endogenous FA, decreased production of superoxide anion, and content of hydrogen peroxide and malondialdehyde, and also increased relative water content and osmotic potential in the leaves. Thus, pretreatment with FA mitigated the heat stress in the blueberries by elevating endogenous FA content, reducing accumulation of reactive oxygen species, and increasing proline and soluble sugar content. |
Characterization of Citrus WRKY transcription factors and their responses to phytohormones and abiotic stressesV. Vives-Peris, D. Marmaneu, A. Gómez-Cadenas, R. M. Pérez-ClementeBiologia plantarum 62:33-44, 2018 | DOI: 10.1007/s10535-017-0737-4 WRKY transcription factors (TF) family is involved in a huge variety of plant processes, including seed germination, plant development, phytohormone signalling, and defence against both biotic or abiotic stresses. In this work, WRKY TF family has been characterized in citrus. In a first experiment, the relative expression of CsWRKYs was analyzed in shoots and roots of plants treated with abscisic acid (ABA), salicylic acid (SA), and methyl jasmonate (MeJA) under in vitro conditions. Expression of CsWRKYs was also determined in roots of commercial citrus rootstocks subjected to osmotic and salt stresses. A total amount of 50 CsWRKYs has been found and devided into different groups of WRKY family according to the WRKY domain sequences. In response to the applications of phytohormones, the highest differences were observed in roots, and it was found that ABA and SA generally repressed CsWRKYs expressions, but MeJA induced their overexpression. Osmotic stress repressed the expression of most of the CsWRKYs, whereas salt stress induced their expression. Moreover, salt stress induced higher increase in CsWRKY expressions in the tolerant rootstock Citrus macrophylla than in the sensitive rootstock Carrizo citrange, suggesting that these TFs may play an important role in response to this stress. |
Hydrogen sulfide is involved in the regulation of ascorbate and glutathione metabolism by jasmonic acid in Arabidopsis thalianaC. Shan, T. Wang, Y. Zhou, W. WangBiologia plantarum 62:188-193, 2018 | DOI: 10.1007/s10535-017-0740-9 This study investigated the role of hydrogen sulfide (H2S) in the regulation of the ascorbate (AsA) and glutathione (GSH) metabolism by jasmonic acid (JA) in the leaves of Arabidopsis thaliana by using H2S scavenger hypotaurine (HT) and H2S synthetic mutant (SALK_041918, designated Atl-cdes). The results showed that JA significantly increased the H2S content, the activities of L-cysteine desulfhydrase (L-CDes), D-cysteine desulfhydrase (D-CDes), ascorbate peroxidase (APX), glutathione reductase (GR), monodehydroascorbate reductase (MDHAR), dehydroascorbate reductase (DHAR), L-galactono-1,4-lactone dehydrogenase (GalLDH) and γ-glutamylcysteine synthetase (γ-ECS), the ratio of AsA to dehydroascorbate (DHA), and decreased the content of malondialdehyde (MDA) and H2O2 in the wild type of A. thaliana, compared to control. The above effects of JA except the increased activities of L-CDes and D-CDes were suppressed by addition of HT. However, JA and HT+JA had no significant effects on the ratio of reduced GSH to oxidized GSH (GSSG) in the wild type of A. thaliana. Application of HT to the control decreased H2S content, AsA/DHA ratio, and activities of APX, GR, DHAR, MDHAR, γ-ECS, and GalLDH, but had no effects on MDA content, activities of L-CDes and D-CDes, and GSH/GSSG ratio. In the H2S synthetic mutant, JA had no obvious effects on above mentioned parameters except the D-CDes activity compared with the control. Our results suggest that JA-induced H2S, which is a signal that leads to the up-regulation of the AsA and GSH metabolism. |
Over-expression of transcription factor GhWRI1 in upland cottonZ. J. Liu, Y. P. Zhao, W. Liang, Y. P. Cui, Y. M. Wang, J. P. HuaBiologia plantarum 62:335-342, 2018 | DOI: 10.1007/s10535-018-0777-4 Transcription factors are involved in lipid metabolism, and in present study, the transcription factor WRINKLED 1 (GhWRI1) was cloned from Gossypium hirsutum L. cv. Coker 201 by reverse transcription (RT)-PCR and rapid amplification of cDNA ends. The Pro35S:WRI1 vector was constructed and transformed into upland cotton cv. Sumian 20 using the pollen tube pathway method. After PCR and Southern blot verification of the positive transgenic plants, T2 transgenic lines derived from T1 individuals with the insertion gene in a single copy were chosen for further dissection. Semi-quantitative and quantitative RT-PCR analyses indicated that GhWRI1 gene expression increased in transgenic plants compared with that in the wild-type. Seed lipid content increased at most transgenic plants, and at the same time, protein content decreased. Compared to the control, major agronomical traits were not affected by overexpression of GhWRI1 in transgenic plants. |
Overexpression of transcription factor SlNAC35 enhances the chilling tolerance of transgenic tomatoG.-D. Wang, Q. Liu, X.-T. Shang, C. Chen, N. Xu, J. Guan, Q.-W. MengBiologia plantarum 62:479-488, 2018 | DOI: 10.1007/s10535-018-0770-y The NAC (NAM, ATAF1/2, and CUC2) transcription factor family participates in responses to various kinds of environmental stimuli in plants. However, the roles of NAC protein in cold resistance, especially in the cold resistance of tomatoes, are not completely understood. This study examined the roles of a tomato (Solanum lycopersicum) NAC transcription factor (SlNAC35) in resisting chilling using transgenic tomatoes. GUS staining and expression analysis revealed that SlNAC35 expression was induced at 4 °C, thereby suggesting its involvement in plant responses to chilling stress. Moreover, transgenic lines over-expressing SlNAC35 exhibited high chlorophyll content, fresh mass, and low accumulation of reactive oxygen species and membrane damage under chilling stress. These results indicated that SlNAC35 overexpression enhanced the chilling tolerance of transgenic tomatoes. High expressions of cold tolerance markers SlCOR518 and SlCOR413IM1 were observed under chilling stress in transgenic lines. This observation suggested that SlNAC35 overexpression enhanced the chilling tolerance of transgenic lines by involving the c-repeat binding factor-cold stress response (CBF-COR) signaling pathway and by regulating SlCOR expression. |
Transcriptional regulation of salinity stress: role and spatio-temporal expressions of ion-transporter gene promotersP. K. Agarwal, A. Dave, P. AgarwalBiologia plantarum 62:641-646, 2018 | DOI: 10.1007/s10535-018-0815-2 Ion transporters play an important role in ion homeostasis and control ion flow from its intrusion to exclusion in the entire plant system. Abiotic stress tolerance in plants depends immensely on the activity of these transporters. The transporter proteins are transcriptionally regulated by cis-elements present in their upstream region for specific activity. The presence of different cis-elements facilitates cross-talk between different signal transduction pathways. Depending on the cis-elements, a specific stress signalling pathway is activated, eliciting a physiological change towards maintaining ion homeostasis to alleviate stress. Beta-glucuronidase localization studies using various promoter regions indicated their expression specificity in organs/tissues. This review gives an overview about promoter activity of different transporters and its involvement under salinity stress. |
Photochemical reflectance index and solar-induced fluorescence for assessing cotton photosynthesis under water-deficit stressY. J. Zhang, M. Y. Hou, H. Y. Xue, L. T. Liu, H. C. Sun, C. D. Li, X. J. DongBiologia plantarum 62:817-825, 2018 | DOI: 10.1007/s10535-018-0821-4 Rapid and non-destructive assessment of water status is essential to enhance crop performance. This study aimed to evaluate photosynthetic performance and to monitor water status in cotton under field conditions. A two-year experiment was conducted with three irrigation regimes to measure the following parameters: photochemical reflectance index (PRI), structural independent pigment index (SIPI), water index (WI), solar-induced fluorescence (SIF; retrieved from reflectance by using Fraunhofer line-depth method), gas exchange, and chlorophyll fluorescence (CF). The results showed that PRI decreased > 30 % in moderate drought (MD) and >50 % in severe drought (SD), compared with control. PRI was found to be positively correlated with net photosynthetic rate (PN), stomatal conductance (gs), transpiration rate (Tr), actual quantum yield of photosystem II photochemistry (ΦPSII), but a negatively correlated with nonphotochemical quenching (NPQ). Solar-induced fluorescence around 761 nm (SIF761) had significant correlations with PN, ΦPSII, and NPQ, but not with maximal quantum yield of PS II photochemistry (Fv/Fm). The relationship between PRI and PN was stronger at the beginning of water stress (R2 = 0.86) than for the all stress stages (R2 = 0.54), indicating that PRI could be more effective for assessing PN of cotton at early water stress. PRI was better correlated with relative water content and photosynthetic parameters than SIPI and WI and so it could also be a good indicator to evaluate cotton water status. |
Genome-wide analysis of heptahelical protein (HHP) gene family and expression of BcHHP1 in response to stresses in Brassica rapaJ. Wang, F.Y. Huang, X.L. Hou, X. YouBiologia plantarum 63:219-227, 2019 | DOI: 10.32615/bp.2019.025 Heptahelical protein (HHP) signalling pathway is involved in cold acclimation responses to low temperature and other stresses. The HHP transcription factor family is the key component regulating this signalling pathway. In this study, five HHP-like genes, BcHHP1, BcHHP2, BcHHP3, BcHHP4, and BcHHP5, were isolated from non-heading Chinese cabbage (Brassica rapa ssp. chinensis cv. Suzhouqing). Multiple sequence alignment and phylogenetic analysis showed that BcHHP proteins are highly homologous to HHP proteins from Arabidopsis thaliana, Glycine max, Oryza sativa, and Zea mays. Some of these HHP proteins might share similar functions in some aspects, which might be further proved by interaction network of BcHHP genes. Furthermore, real-time quantitative PCR showed that BcHHP1 was induced under cold and salt treatments. Besides, BcHHP1 was also accumulated in response to abscisic acid and salicylic acid, indicating that BcHHP1 gene might participate in response to hormone treatments. In addition, a BcHHP1-YFP fusion protein was localized to the nucleus and cytoplasm. These results indicated that five BcHHP genes might play important roles in a functional HHP signalling pathway responding to cold treatment. This work might be useful for future functional analysis of other HHP-like genes. |
Transcriptome sequencing flower petals reveals insights into regulation of flavonoid biosynthesis in Osmanthus fragransY.J. HAN*, M.F. DONG, H.Y. WANG, X.D. WANG, K. LI, F.D. SHANG*Biologia plantarum 63:765-775, 2019 | DOI: 10.32615/bp.2019.146 Osmanthus fragrans Lour., one of the top 10 most popular flowers in China, is known for both its beauty and fragrance. It is rich in flavonoids, a class of secondary metabolites with significant neuroprotective, free-radical scavenging, and anti-oxidant activity. To understand the mechanisms regulating flavonoid biosynthesis, we conducted transcriptome sequencing O. fragrans flowers to analyze gene expressions during the full flowering stage. The RNA was isolated separately from petals of cvs. Yingui and Dangui, which were treated or not with jasmonic acid, salicylic acid, or abscisic acid. A total of 142 029 unigenes were denovo assembled, and 50 918 unigenes were annotated. The differentially expressed genes were identified, annotated, and classified. The results of transcriptome sequencing and real-time PCR revealed higher expressions of phenylalanine ammonia-lyase (PAL), PAL1, chalcone synthase (CHS), flavanone-3-hydroxylase (F3H), flavonol synthase (FLS), and lower expressions of dihydroflavonol-4-reductase (DFR), anthocyanidin synthase (ANS) in 'Yingui' than in 'Dangui'. Such an expression pattern facilitated the higher accumulation of flavonoids in 'Yingui'. Several genes of the flavonoid biosynthesis pathway were upregulated by jasmonic acid and salicylic acid in both the cultivars leading to flavonoid accumulation in their petals. In the v-myb avian myeloblastosis viral oncogene homolog 1(MYB1)-overexpressing petals, the expressions of PAL, PAL1, CHI, and FLS increased. The results suggest that MYB1 may participate in the flavonoid biosynthesis pathway and regulate the expression of some upstream genes in O. fragrans. |


